cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_01F-N1-BDNA-1_B23KFG5LT4_1.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed 1029_01F-N1-BDNA-1_B23KFG5LT4_1_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:181000001, elapsed 1.2s, est remaining 22.1s, peak mem 1047MB, user 26.8s, sys 1.1s, output queue size 145
progress 10% @chr1:248000001, elapsed 2.1s, est remaining 18.5s, peak mem 1264MB, user 57.1s, sys 1.5s, output queue size 74
progress 15% @chr3:18000001, elapsed 3.1s, est remaining 17.5s, peak mem 1751MB, user 85.4s, sys 2.0s, output queue size 203
progress 20% @chr3:155000001, elapsed 4.0s, est remaining 16.1s, peak mem 2167MB, user 112.3s, sys 2.5s, output queue size 364
progress 25% @chr4:124000001, elapsed 4.8s, est remaining 14.3s, peak mem 2245MB, user 135.4s, sys 2.8s, output queue size 525
progress 30% @chr5:106000001, elapsed 5.4s, est remaining 12.5s, peak mem 2280MB, user 155.4s, sys 3.8s, output queue size 464
progress 35% @chr6:44000001, elapsed 6.2s, est remaining 11.4s, peak mem 2317MB, user 176.9s, sys 4.2s, output queue size 625
progress 40% @chr7:64000001, elapsed 7.2s, est remaining 10.7s, peak mem 2375MB, user 201.3s, sys 4.4s, output queue size 786
progress 45% @chr8:74000001, elapsed 8.4s, est remaining 10.2s, peak mem 2403MB, user 241.0s, sys 4.9s, output queue size 204
progress 50% @chr9:88000001, elapsed 9.3s, est remaining 9.3s, peak mem 2472MB, user 269.0s, sys 5.3s, output queue size 366
progress 55% @chr10:96000001, elapsed 10.5s, est remaining 8.6s, peak mem 2486MB, user 307.0s, sys 6.0s, output queue size 348
progress 60% @chr12:5000001, elapsed 11.8s, est remaining 7.8s, peak mem 2487MB, user 342.3s, sys 6.3s, output queue size 510
progress 65% @chr13:26000001, elapsed 13.2s, est remaining 7.1s, peak mem 2491MB, user 385.2s, sys 6.9s, output queue size 672
progress 70% @chr14:84000001, elapsed 14.0s, est remaining 6.0s, peak mem 2491MB, user 408.4s, sys 7.2s, output queue size 833
progress 75% @chr16:41000001, elapsed 15.5s, est remaining 5.2s, peak mem 2557MB, user 455.2s, sys 7.5s, output queue size 461
progress 80% @chr16:89000001, elapsed 17.9s, est remaining 4.5s, peak mem 2564MB, user 519.6s, sys 8.0s, output queue size 623
progress 85% @chr19:40000001, elapsed 19.8s, est remaining 3.5s, peak mem 2574MB, user 586.2s, sys 8.6s, output queue size 351
progress 90% @chrX:32000001, elapsed 21.0s, est remaining 2.3s, peak mem 2674MB, user 625.8s, sys 8.9s, output queue size 513
progress 95% @chrY:52000001, elapsed 22.0s, est remaining 1.2s, peak mem 2674MB, user 650.5s, sys 9.1s, output queue size 675
progress 100% @chrX:67000001, elapsed 23.8s, est remaining 0.0s, peak mem 2685MB, user 687.2s, sys 9.6s, output queue size 3540
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 14565271327
reads: 309644897
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 289.818 user 6.886 sys 295.662 real
done: 1 calls 0.533 user 0.000 sys 0.537 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.002 real
execute: 1 calls 0.004 user 0.002 sys 23.862 real
idle: 104 calls 0.145 user 0.007 sys 74.014 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 2816204800 mem 689.384 user 9.937 sys 25.435 real