|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (NA12878_rep1)
|
1h 41m |
52s |
1h 40m |
5s |
28.3 GB |
118% |
746.4 MB |
102.6 MB |
0 bytes |
102.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE (NA12878_rep1)
|
9s |
8s |
0s |
0s |
13.9 MB |
126% |
1005.3 KB |
2.0 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (NA12878_rep1)
|
4m 52s |
4s |
2m 39s |
2m 9s |
1.9 GB |
217% |
20.5 GB |
676.1 MB |
20.2 GB |
676.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (NA12878_rep1)
|
9m 25s |
5s |
7m 17s |
2m 3s |
11.2 MB |
130% |
20.2 GB |
154.4 KB |
20.2 GB |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:MULTIQC
|
1m 5s |
56s |
6s |
2s |
616.0 MB |
82% |
75.2 MB |
18.3 MB |
0 bytes |
18.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (NA12878_rep1;sentieon_haplotyper)
|
6s |
5s |
- |
- |
3.2 MB |
1574% |
127.4 KB |
3.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_SUMMARY (NA12878_rep1;sentieon_haplotyper)
|
6s |
3s |
- |
- |
9.4 MB |
85% |
59.9 KB |
2.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (NA12878_rep1;sentieon_haplotyper)
|
5s |
3s |
- |
- |
9.1 MB |
125% |
59.9 KB |
2.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_QUAL (NA12878_rep1;sentieon_haplotyper)
|
6s |
3s |
- |
- |
9.4 MB |
132% |
59.9 KB |
2.4 KB |
0 bytes |
12.0 KB |
1 |