sample gene amp_del log2_ratio chrom gene_start gene_end consequence 1166b_EFI C8orf58 DEL -1.59885 chr8 22599646 22604150 DEL 1166b_EFI CCAR2 DEL -1.3792 chr8 22604631 22621514 DEL 1166b_EFI BIN3 DEL -1.49197 chr8 22620417 22669120 DEL 1166b_EFI EGR3 DEL -1.43514 chr8 22687658 22693302 DEL 1166b_EFI RHOBTB2 DEL -1.37079 chr8 22987416 23018441 DEL 1166b_EFI TNFRSF10B DEL -1.4479 chr8 23020132 23069179 DEL 1166b_EFI KLLN DEL -1.6769 chr10 87859160 87863437 DEL 1166b_EFI PTEN DEL -1.35103 chr10 87863112 87971930 DEL