sample gene amp_del log2_ratio chrom gene_start gene_end consequence 1166b_G89 ZNF705G DEL -2.31315 chr8 7355516 7385558 DEL 1166b_G89 RP1L1 DEL -1.35903 chr8 10606348 10655102 DEL 1166b_G89 SLC35G5 DEL -1.36728 chr8 11330887 11332208 DEL 1166b_G89 USP17L2 DEL -2.38333 chr8 12137167 12139077 DEL 1166b_G89 TAS2R43 DEL -2.28625 chr12 11091286 11092313 DEL 1166b_G89 VAT1L DEL -1.40885 chr16 77788529 77980107 DEL 1166b_G89 LGALS9C DEL -1.44722 chr17 18476773 18494945 DEL 1166b_G89 FAM106A DEL -2.48087 chr17 18524565 18526846 DEL 1166b_G89 TCEB3C DEL -2.03259 chr18 47028201 47030078 DEL