File Info
- Filename
- 1166b_HYK.cnv.hmnz.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/01_altera_exact_survey_feb26/Harmonize_dspe1166__b003992--20260226-163831/1166b_HYK/variants/cnv/1166b_HYK.cnv.hmnz.tsv
- Size
- 3.1 KB
- Workflow Run
- Harmonize_dspe1166
- Published
- Feb 26, 2026 8:47 AM
Content
View in new tab| sample | gene | amp_del | log2_ratio | chrom | gene_start | gene_end | consequence |
| 1166b_HYK | PRAMEF4 | DEL | -1.35824 | chr1 | 12879223 | 12886201 | DEL |
| 1166b_HYK | TXNIP | AMP | 1.064 | chr1 | 145992435 | 145996601 | DUP |
| 1166b_HYK | BTG2 | AMP | 1.24507 | chr1 | 203305535 | 203309602 | DUP |
| 1166b_HYK | PCBP1 | AMP | 1.16456 | chr2 | 70087452 | 70089200 | DUP |
| 1166b_HYK | RPL37A | AMP | 1.05226 | chr2 | 216498188 | 216503551 | DUP |
| 1166b_HYK | CRIPAK | DEL | -1.41758 | chr4 | 1391551 | 1395992 | DEL |
| 1166b_HYK | ANXA2R | AMP | 1.11532 | chr5 | 43039232 | 43043170 | DUP |
| 1166b_HYK | HIST1H1C | AMP | 1.34983 | chr6 | 26055739 | 26056471 | DUP |
| 1166b_HYK | HIST1H1E | AMP | 1.47576 | chr6 | 26156330 | 26157115 | DUP |
| 1166b_HYK | HIST1H2AE | AMP | 1.21345 | chr6 | 26216936 | 26217483 | DUP |
| 1166b_HYK | CITED2 | AMP | 1.12565 | chr6 | 139372255 | 139374620 | DUP |
| 1166b_HYK | HSPB1 | AMP | 1.15353 | chr7 | 76302543 | 76304295 | DUP |
| 1166b_HYK | IFNA4 | DEL | -1.48068 | chr9 | 21186617 | 21187599 | DEL |
| 1166b_HYK | IFNA10 | DEL | -1.49564 | chr9 | 21206180 | 21207143 | DEL |
| 1166b_HYK | IFNA17 | DEL | -1.37952 | chr9 | 21227242 | 21228222 | DEL |
| 1166b_HYK | IFNA14 | DEL | -1.39492 | chr9 | 21239201 | 21239979 | DEL |
| 1166b_HYK | IFNA5 | DEL | -2.38324 | chr9 | 21304613 | 21305313 | DEL |
| 1166b_HYK | TAF1L | DEL | -1.5526 | chr9 | 32629453 | 32635669 | DEL |
| 1166b_HYK | SPATA31A6 | DEL | -1.80454 | chr9 | 42183659 | 42189883 | DEL |
| 1166b_HYK | RP11-160N1.10 | DEL | -1.51818 | chr9 | 61659732 | 61662690 | DEL |
| 1166b_HYK | SPATA31A3 | DEL | -1.63897 | chr9 | 66986304 | 66992551 | DEL |
| 1166b_HYK | GADD45G | AMP | 1.10395 | chr9 | 89605012 | 89606555 | DUP |
| 1166b_HYK | DDIT4 | AMP | 1.12061 | chr10 | 72273919 | 72276036 | DUP |
| 1166b_HYK | NUTM2B | DEL | -1.74583 | chr10 | 79703226 | 79712751 | DEL |
| 1166b_HYK | C11orf83 | AMP | 1.16299 | chr11 | 62670272 | 62673577 | DUP |
| 1166b_HYK | FAU | AMP | 1.01987 | chr11 | 65120627 | 65122473 | DUP |
| 1166b_HYK | CDK2AP2 | AMP | 1.04035 | chr11 | 67506496 | 67508631 | DUP |
| 1166b_HYK | CREBZF | AMP | 1.11591 | chr11 | 85659707 | 85665102 | DUP |
| 1166b_HYK | FGF6 | DEL | -1.38769 | chr12 | 4434142 | 4445614 | DEL |
| 1166b_HYK | PRB1 | DEL | -1.36123 | chr12 | 11351822 | 11355591 | DEL |
| 1166b_HYK | HNF1A | DEL | -1.47843 | chr12 | 120978542 | 121002512 | DEL |
| 1166b_HYK | MUC8 | DEL | -2.24247 | chr12 | 132472747 | 132474140 | DEL |
| 1166b_HYK | TPT1 | AMP | 1.09229 | chr13 | 45337177 | 45341370 | DUP |
| 1166b_HYK | ARF6 | AMP | 1.2252 | chr14 | 49893091 | 49894772 | DUP |
| 1166b_HYK | ZFP36L1 | AMP | 1.10442 | chr14 | 68787661 | 68793240 | DUP |
| 1166b_HYK | EID1 | AMP | 1.1565 | chr15 | 48877885 | 48880183 | DUP |
| 1166b_HYK | C16orf91 | AMP | 1.01282 | chr16 | 1419942 | 1429344 | DUP |
| 1166b_HYK | PFN1 | AMP | 1.00475 | chr17 | 4945651 | 4949014 | DUP |
| 1166b_HYK | RNASEK | AMP | 1.0776 | chr17 | 7012416 | 7014532 | DUP |
| 1166b_HYK | AC040977.1 | AMP | 1.08428 | chr17 | 7012608 | 7014436 | DUP |
| 1166b_HYK | GABARAP | AMP | 1.06476 | chr17 | 7240013 | 7242770 | DUP |
| 1166b_HYK | LSMD1 | AMP | 1.21293 | chr17 | 7856684 | 7857854 | DUP |
| 1166b_HYK | RPL23A | AMP | 1.03366 | chr17 | 28719392 | 28724359 | DUP |
| 1166b_HYK | EIF1 | AMP | 1.14445 | chr17 | 41688892 | 41692668 | DUP |
| 1166b_HYK | HEXIM1 | AMP | 1.38962 | chr17 | 45147316 | 45152101 | DUP |
| 1166b_HYK | GADD45B | AMP | 1.20163 | chr19 | 2476126 | 2478259 | DUP |
| 1166b_HYK | JUNB | AMP | 1.16133 | chr19 | 12791495 | 12793310 | DUP |
| 1166b_HYK | IER2 | AMP | 1.12049 | chr19 | 13151974 | 13154908 | DUP |
| 1166b_HYK | PSENEN | AMP | 1.13685 | chr19 | 35745113 | 35747010 | DUP |
| 1166b_HYK | ZFP36 | AMP | 1.08694 | chr19 | 39406812 | 39409412 | DUP |
| 1166b_HYK | FTL | AMP | 1.25559 | chr19 | 48965300 | 48966878 | DUP |
| 1166b_HYK | RPS11 | AMP | 1.00544 | chr19 | 49496373 | 49499689 | DUP |
| 1166b_HYK | SOX10 | DEL | -1.39927 | chr22 | 37972299 | 37984537 | DEL |
| 1166b_HYK | TSC22D3 | AMP | 1.18163 | chrX | 107713223 | 107775787 | DUP |
55 rows