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Filename
1166b_JK9.cnv.hmnz.tsv
Full Path
s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/01_altera_exact_survey_feb26/Harmonize_dspe1166__b003992--20260226-163831/1166b_JK9/variants/cnv/1166b_JK9.cnv.hmnz.tsv
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1.5 KB
Workflow Run
Harmonize_dspe1166
Published
Feb 26, 2026 8:47 AM

Content

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sample gene amp_del log2_ratio chrom gene_start gene_end consequence
1166b_JK9 HES3 AMP 1.10425 chr1 6244191 6245578 DUP
1166b_JK9 GPR62 DEL -1.35932 chr3 51955313 51957493 DEL
1166b_JK9 TRIO AMP 1.14405 chr5 14143701 14510204 DUP
1166b_JK9 SOX4 AMP 1.69769 chr6 21593740 21598616 DUP
1166b_JK9 PRL AMP 2.19194 chr6 22287250 22297501 DUP
1166b_JK9 HDGFL1 AMP 1.17104 chr6 22569565 22571663 DUP
1166b_JK9 NFKBIE AMP 1.04635 chr6 44258165 44265763 DUP
1166b_JK9 TMEM151B AMP 1.03616 chr6 44270465 44279444 DUP
1166b_JK9 RP11-444E17.6 AMP 1.01311 chr6 44273193 44378957 DUP
1166b_JK9 AARS2 AMP 1.01954 chr6 44299653 44313326 DUP
1166b_JK9 CDC5L AMP 1.02845 chr6 44387524 44450426 DUP
1166b_JK9 SUPT3H AMP 1.06031 chr6 44828731 45377933 DUP
1166b_JK9 CNTNAP3 DEL -2.19766 chr9 39072766 39288138 DEL
1166b_JK9 CBWD6 DEL -1.57154 chr9 41131308 41189364 DEL
1166b_JK9 SYNPO2L AMP 1.02109 chr10 73644880 73656072 DUP
1166b_JK9 AP3M1 AMP 1.04155 chr10 74121765 74151063 DUP
1166b_JK9 ADK AMP 1.11754 chr10 74151228 74708475 DUP
1166b_JK9 KAT6B AMP 1.33582 chr10 74826624 75032622 DUP
1166b_JK9 DUPD1 AMP 1.44287 chr10 75037835 75058514 DUP
1166b_JK9 DUSP13 AMP 1.43649 chr10 75094675 75109191 DUP
1166b_JK9 SAMD8 AMP 1.34015 chr10 75111634 75182123 DUP
1166b_JK9 VDAC2 AMP 1.32294 chr10 75210847 75231277 DUP
1166b_JK9 COMTD1 AMP 1.36193 chr10 75233968 75236011 DUP
1166b_JK9 ZNF503 AMP 1.45564 chr10 75397829 75401906 DUP
1166b_JK9 PHLDA2 DEL -2.0699 chr11 2928272 2929455 DEL
1166b_JK9 NAP1L4 DEL -2.08585 chr11 2944436 2992377 DEL
1166b_JK9 ACOT1 DEL -1.82163 chr14 73537113 73543794 DEL
28 rows