sample gene amp_del log2_ratio chrom gene_start gene_end consequence 1173_MHK GET4 AMP 1.17522 chr7 876551 896434 DUP 1173_MHK UNCX AMP 1.40248 chr7 1232906 1237318 DUP 1173_MHK MICALL2 AMP 1.18137 chr7 1434365 1459502 DUP 1173_MHK INTS1 AMP 1.17472 chr7 1470276 1504367 DUP 1173_MHK TMEM184A AMP 1.16608 chr7 1542234 1556430 DUP 1173_MHK ELFN1 AMP 1.27032 chr7 1688118 1747954 DUP 1173_MHK CTAGE1 AMP 1.71205 chr18 22413609 22417915 DUP 1173_MHK TCEB3C DEL -1.4185 chr18 47028201 47030078 DEL 1173_MHK MAPK4 DEL -1.41876 chr18 50560077 50731824 DEL 1173_MHK ME2 DEL -1.36375 chr18 50879048 50948321 DEL 1173_MHK RP11-729L2.2 DEL -1.44763 chr18 50968018 51058144 DEL 1173_MHK SMAD4 DEL -1.46092 chr18 51030212 51085039 DEL 1173_MHK MBD2 DEL -1.37417 chr18 54152708 54224788 DEL 1173_MHK C18orf54 DEL -1.47914 chr18 54358584 54382032 DEL