sample gene amp_del log2_ratio chrom gene_start gene_end consequence 1173_JNY SP4 AMP 1.07343 chr7 21428033 21514822 DUP 1173_JNY GRIP1 AMP 2.28982 chr12 66347430 66678973 DUP 1173_JNY CAND1 AMP 2.64481 chr12 67269280 67319951 DUP 1173_JNY DYRK2 AMP 2.52391 chr12 67648720 67665406 DUP 1173_JNY NUP107 AMP 2.80821 chr12 68686733 68743005 DUP 1173_JNY MDM2 AMP 2.77022 chr12 68808175 68845434 DUP 1173_JNY CPM AMP 2.72297 chr12 68851174 68933199 DUP 1173_JNY CPSF6 AMP 3.00987 chr12 69239536 69274358 DUP 1173_JNY FRS2 AMP 2.87655 chr12 69470348 69579779 DUP 1173_JNY CCT2 AMP 3.1594 chr12 69585333 69601570 DUP 1173_JNY BEST3 AMP 2.61834 chr12 69653608 69699416 DUP 1173_JNY RAB3IP AMP 2.52543 chr12 69739389 69823204 DUP 1173_JNY TK2 AMP 1.61972 chr16 66509378 66550412 DUP 1173_JNY CKLF-CMTM1 AMP 1.55031 chr16 66552612 66579135 DUP 1173_JNY CMTM1 AMP 1.43475 chr16 66566446 66579137 DUP 1173_JNY CMTM2 AMP 1.4392 chr16 66579456 66588275 DUP 1173_JNY CMTM4 AMP 1.50601 chr16 66614749 66696707 DUP 1173_JNY DYNC1LI2 AMP 1.529 chr16 66720892 66751798 DUP 1173_JNY CCDC79 AMP 1.33291 chr16 66754975 66801620 DUP 1173_JNY FAM96B AMP 1.54491 chr16 66932055 66934400 DUP 1173_JNY CES2 AMP 1.38356 chr16 66934459 66945096 DUP 1173_JNY CBFB AMP 1.53776 chr16 67029244 67101022 DUP 1173_JNY B3GNT9 AMP 1.40761 chr16 67148104 67151214 DUP 1173_JNY TRADD AMP 1.43998 chr16 67154179 67160298 DUP 1173_JNY FBXL8 AMP 1.49476 chr16 67159930 67164176 DUP 1173_JNY HSF4 AMP 1.3953 chr16 67163384 67169945 DUP 1173_JNY NOL3 AMP 1.33501 chr16 67174001 67175735 DUP 1173_JNY EXOC3L1 AMP 1.40756 chr16 67184365 67190204 DUP 1173_JNY FHOD1 AMP 1.43355 chr16 67229388 67247658 DUP 1173_JNY SLC9A5 AMP 1.34291 chr16 67248949 67272190 DUP 1173_JNY ATP6V0D1 AMP 1.39603 chr16 67438018 67481237 DUP 1173_JNY ACD AMP 1.39572 chr16 67657531 67660743 DUP 1173_JNY PARD6A AMP 1.60351 chr16 67660958 67662774 DUP 1173_JNY ENKD1 AMP 1.3956 chr16 67662944 67666764 DUP 1173_JNY C16orf86 AMP 1.42739 chr16 67666815 67668758 DUP 1173_JNY CENPT AMP 1.34587 chr16 67828156 67847458 DUP 1173_JNY PSMB10 AMP 1.69637 chr16 67934501 67937087 DUP 1173_JNY DDX28 AMP 1.34546 chr16 68021275 68023867 DUP