File Info
- Filename
- 1173_RDM.cnv.hmnz.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/01_altera_exact_survey_feb26/Harmonize_dspe1173__b003992--20260226-165137/1173_RDM/variants/cnv/1173_RDM.cnv.hmnz.tsv
- Size
- 3.0 KB
- Workflow Run
- Harmonize_dspe1173
- Published
- Feb 26, 2026 9:00 AM
Content
View in new tab| sample | gene | amp_del | log2_ratio | chrom | gene_start | gene_end | consequence |
| 1173_RDM | PAX7 | DEL | -1.42602 | chr1 | 18631005 | 18736138 | DEL |
| 1173_RDM | HIST2H2BE | AMP | 1.32231 | chr1 | 149884459 | 149886682 | DUP |
| 1173_RDM | HIST2H2AC | AMP | 1.36749 | chr1 | 149886974 | 149887411 | DUP |
| 1173_RDM | IRF2BP2 | AMP | 1.372 | chr1 | 234604268 | 234609525 | DUP |
| 1173_RDM | ZFP36L2 | AMP | 1.08723 | chr2 | 43222401 | 43226609 | DUP |
| 1173_RDM | PCBP1 | AMP | 1.28635 | chr2 | 70087452 | 70089200 | DUP |
| 1173_RDM | HSPE1 | AMP | 1.04679 | chr2 | 197499993 | 197503457 | DUP |
| 1173_RDM | BHLHE40 | AMP | 1.3902 | chr3 | 4979115 | 4985323 | DUP |
| 1173_RDM | RAP2B | AMP | 1.47512 | chr3 | 153162239 | 153168476 | DUP |
| 1173_RDM | UBE2D3 | AMP | 1.29644 | chr4 | 102797356 | 102868896 | DUP |
| 1173_RDM | ANXA2R | AMP | 1.25871 | chr5 | 43039232 | 43043170 | DUP |
| 1173_RDM | HIST1H2AB | AMP | 1.24132 | chr6 | 26033091 | 26033568 | DUP |
| 1173_RDM | HIST1H2BC | AMP | 1.17652 | chr6 | 26114872 | 26123910 | DUP |
| 1173_RDM | HIST1H2AC | AMP | 1.243 | chr6 | 26124144 | 26139116 | DUP |
| 1173_RDM | HIST1H1E | AMP | 1.44817 | chr6 | 26156330 | 26157115 | DUP |
| 1173_RDM | HIST1H2BD | AMP | 1.04294 | chr6 | 26158145 | 26171349 | DUP |
| 1173_RDM | HIST1H3D | AMP | 1.18362 | chr6 | 26196839 | 26199293 | DUP |
| 1173_RDM | HIST1H2BJ | AMP | 1.15907 | chr6 | 27125896 | 27132750 | DUP |
| 1173_RDM | HIST1H2AG | AMP | 1.11626 | chr6 | 27133052 | 27135291 | DUP |
| 1173_RDM | HIST1H2BK | AMP | 1.0291 | chr6 | 27138293 | 27146840 | DUP |
| 1173_RDM | HIST1H2AH | AMP | 1.03311 | chr6 | 27147081 | 27147538 | DUP |
| 1173_RDM | HIST1H2BL | AMP | 1.00597 | chr6 | 27807478 | 27807931 | DUP |
| 1173_RDM | HIST1H2AK | AMP | 1.22124 | chr6 | 27837879 | 27838339 | DUP |
| 1173_RDM | HSPA1B | AMP | 1.242 | chr6 | 31827734 | 31830254 | DUP |
| 1173_RDM | CITED2 | AMP | 1.24078 | chr6 | 139372255 | 139374620 | DUP |
| 1173_RDM | HSPB1 | AMP | 1.25643 | chr7 | 76302543 | 76304295 | DUP |
| 1173_RDM | RP11-863K10.7 | AMP | 1.33711 | chr8 | 37734760 | 37737426 | DUP |
| 1173_RDM | KLF9 | AMP | 1.22378 | chr9 | 70384586 | 70414624 | DUP |
| 1173_RDM | KLF6 | AMP | 1.25139 | chr10 | 3775995 | 3785275 | DUP |
| 1173_RDM | DDIT4 | AMP | 1.2949 | chr10 | 72273919 | 72276036 | DUP |
| 1173_RDM | KLLN | AMP | 1.18329 | chr10 | 87859160 | 87863437 | DUP |
| 1173_RDM | AC103801.2 | AMP | 1.04572 | chr11 | 22625313 | 22625823 | DUP |
| 1173_RDM | CREBZF | AMP | 1.05411 | chr11 | 85659707 | 85665102 | DUP |
| 1173_RDM | CDKN1B | AMP | 1.24374 | chr12 | 12717123 | 12722371 | DUP |
| 1173_RDM | C12orf61 | AMP | 1.03258 | chr12 | 62601750 | 62603434 | DUP |
| 1173_RDM | PHLDA1 | AMP | 1.13903 | chr12 | 76025446 | 76033932 | DUP |
| 1173_RDM | BTG1 | AMP | 1.14411 | chr12 | 92142509 | 92145897 | DUP |
| 1173_RDM | ARF6 | AMP | 1.36776 | chr14 | 49893091 | 49894772 | DUP |
| 1173_RDM | ZFP36L1 | AMP | 1.27521 | chr14 | 68787661 | 68793240 | DUP |
| 1173_RDM | FOS | AMP | 1.10078 | chr14 | 75278773 | 75282230 | DUP |
| 1173_RDM | HEXIM1 | AMP | 1.1448 | chr17 | 45147316 | 45152101 | DUP |
| 1173_RDM | TGIF1 | AMP | 1.04307 | chr18 | 3451676 | 3458411 | DUP |
| 1173_RDM | JUNB | AMP | 1.33292 | chr19 | 12791495 | 12793310 | DUP |
| 1173_RDM | IER2 | AMP | 1.03232 | chr19 | 13151974 | 13154908 | DUP |
| 1173_RDM | C19orf33 | AMP | 1.07936 | chr19 | 38304160 | 38305009 | DUP |
| 1173_RDM | HNRNPL | AMP | 1.09223 | chr19 | 38836387 | 38850333 | DUP |
| 1173_RDM | PAF1 | AMP | 1.32348 | chr19 | 39385851 | 39391195 | DUP |
| 1173_RDM | MED29 | AMP | 1.87421 | chr19 | 39391310 | 39400637 | DUP |
| 1173_RDM | ZFP36 | AMP | 2.44381 | chr19 | 39406812 | 39409412 | DUP |
| 1173_RDM | RPS16 | AMP | 1.66255 | chr19 | 39433206 | 39435948 | DUP |
| 1173_RDM | TIMM50 | AMP | 1.01216 | chr19 | 39480411 | 39489928 | DUP |
| 1173_RDM | EID2B | AMP | 1.22179 | chr19 | 39530989 | 39532854 | DUP |
| 1173_RDM | EID2 | AMP | 1.24477 | chr19 | 39538249 | 39540230 | DUP |
| 1173_RDM | FTL | AMP | 1.09093 | chr19 | 48965300 | 48966878 | DUP |
55 rows