sample	gene	amp_del	log2_ratio	chrom	gene_start	gene_end	consequence
1173_QK4	PLCH2	DEL	-1.44837	chr1	2476314	2505525	DEL
1173_QK4	ACTRT2	DEL	-1.90484	chr1	3021481	3022901	DEL
1173_QK4	PTCHD2	DEL	-1.42986	chr1	11479237	11537584	DEL
1173_QK4	PRAMEF12	DEL	-1.50544	chr1	12774840	12777906	DEL
1173_QK4	PRAMEF1	DEL	-1.38941	chr1	12791396	12796628	DEL
1173_QK4	PRAMEF11	DEL	-1.52862	chr1	12824609	12831410	DEL
1173_QK4	PRAMEF2	DEL	-1.4061	chr1	12857085	12861909	DEL
1173_QK4	PRAMEF4	DEL	-1.60016	chr1	12879223	12886201	DEL
1173_QK4	ACTL8	DEL	-1.37644	chr1	17755312	17827063	DEL
1173_QK4	PAX7	DEL	-1.43541	chr1	18631005	18736138	DEL
1173_QK4	TAS1R2	DEL	-1.43041	chr1	18839598	18859682	DEL
1173_QK4	EPHA8	DEL	-1.41512	chr1	22563563	22603594	DEL
1173_QK4	C1QB	DEL	-1.39525	chr1	22653188	22661536	DEL
1173_QK4	UROD	AMP	1.06732	chr1	45012146	45015575	DUP
1173_QK4	HIST2H2AC	AMP	1.31034	chr1	149886974	149887411	DUP
1173_QK4	IRF2BP2	AMP	1.41398	chr1	234604268	234609525	DUP
1173_QK4	PCBP1	AMP	1.24653	chr2	70087452	70089200	DUP
1173_QK4	AQP12A	DEL	-1.43905	chr2	240691850	240698479	DEL
1173_QK4	SOX4	AMP	1.21837	chr6	21593740	21598616	DUP
1173_QK4	HIST1H1C	AMP	1.19976	chr6	26055739	26056471	DUP
1173_QK4	HIST1H2AC	AMP	1.15051	chr6	26124144	26139116	DUP
1173_QK4	HIST1H1E	AMP	1.29998	chr6	26156330	26157115	DUP
1173_QK4	HIST1H2BJ	AMP	1.161	chr6	27125896	27132750	DUP
1173_QK4	HIST1H2AK	AMP	1.19794	chr6	27837879	27838339	DUP
1173_QK4	HIST1H1B	AMP	1.14174	chr6	27866791	27867581	DUP
1173_QK4	CITED2	AMP	1.17792	chr6	139372255	139374620	DUP
1173_QK4	CEBPD	AMP	1.69876	chr8	47736908	47739086	DUP
1173_QK4	LCN9	DEL	-1.62909	chr9	135663321	135666103	DEL
1173_QK4	SOHLH1	DEL	-1.5597	chr9	135693410	135699528	DEL
1173_QK4	KCNT1	DEL	-1.40416	chr9	135702191	135793103	DEL
1173_QK4	IFITM3	AMP	1.052	chr11	319668	321050	DUP
1173_QK4	CPT1A	AMP	1.10721	chr11	68754888	68841916	DUP
1173_QK4	MYEOV	AMP	1.40993	chr11	69294154	69297287	DUP
1173_QK4	CCND1	AMP	1.38192	chr11	69641086	69654474	DUP
1173_QK4	ORAOV1	AMP	1.1952	chr11	69665562	69675347	DUP
1173_QK4	FADD	AMP	1.51457	chr11	70203162	70207390	DUP
1173_QK4	PCED1B	AMP	1.15944	chr12	47079602	47236660	DUP
1173_QK4	RPL41	AMP	1.13334	chr12	56116585	56117943	DUP
1173_QK4	ARF6	AMP	1.04367	chr14	49893091	49894772	DUP
1173_QK4	ITPRIPL2	AMP	1.82533	chr16	19113931	19121624	DUP
1173_QK4	EIF1	AMP	1.26105	chr17	41688892	41692668	DUP
1173_QK4	HEXIM1	AMP	1.28127	chr17	45147316	45152101	DUP
1173_QK4	CLEC17A	DEL	-1.36646	chr19	14583122	14610420	DEL
1173_QK4	OR7C1	DEL	-1.43558	chr19	14799145	14800211	DEL
1173_QK4	OR7C2	DEL	-1.46426	chr19	14941488	14942448	DEL
1173_QK4	SLC1A6	DEL	-1.37223	chr19	14950178	14972918	DEL
1173_QK4	HAPLN4	DEL	-1.35784	chr19	19255640	19262796	DEL
1173_QK4	CEBPB	AMP	1.26867	chr20	50190838	50192675	DUP