Runs
RF_Benchmark..G001_round4
Processes
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SUBSAMPLE_VCF_TEST:BCFTOOLS_SORT
SUBSAMPLE_VCF_TEST:BCFTOOLS_VIEW_SUBSAMPLE
SUBSAMPLE_VCF_TEST:BCFTOOLS_VIEW_FILTERMISSING
PREPARE_VCFS_TEST:FIX_VCF_PREFIX
PREPARE_VCFS_TEST:BCFTOOLS_REHEADER_QUERY
12
PREPARE_VCFS_TEST:BCFTOOLS_SPLIT_MULTI
12
VCF_VARIANT_DEDUPLICATION:BCFTOOLS_DEDUP
12
VCF_VARIANT_DEDUPLICATION:BCFTOOLS_SORT
12
PREPARE_VCFS_TEST:BCFTOOLS_NORM
12
PREPARE_VCFS_TEST:PUBLISH_PROCESSED_VCF
12
PREPARE_VCFS_TRUTH:BCFTOOLS_REHEADER_TRUTH
1
PREPARE_VCFS_TRUTH:BCFTOOLS_SPLIT_MULTI
1
VCF_VARIANT_DEDUPLICATION:BCFTOOLS_DEDUP
1
VCF_VARIANT_DEDUPLICATION:BCFTOOLS_SORT
1
PREPARE_VCFS_TRUTH:BCFTOOLS_NORM
1
PREPARE_VCFS_TRUTH:PUBLISH_PROCESSED_VCF
1
REPORT_VCF_STATISTICS:BCFTOOLS_STATS
13
HAPPY_BENCHMARK:HAPPY_HAPPY
12
HAPPY_BENCHMARK:BCFTOOLS_REHEADER_HAPPY_OUTPUT
12
HAPPY_BENCHMARK:BCFTOOLS_VIEW_TRUTH
12
HAPPY_BENCHMARK:BCFTOOLS_REHEADER_1
12
HAPPY_BENCHMARK:BCFTOOLS_VIEW_QUERY
12
HAPPY_BENCHMARK:BCFTOOLS_REHEADER_2
12
HAPPY_BENCHMARK:BCFTOOLS_FILTER_TRUTH_TP
12
HAPPY_BENCHMARK:BCFTOOLS_FILTER_TRUTH_FN
12
HAPPY_BENCHMARK:BCFTOOLS_FILTER_QUERY_TP
12
HAPPY_BENCHMARK:BCFTOOLS_FILTER_QUERY_FP
12
COMPARE_BENCHMARK_RESULTS:REFORMAT_HEADER
48
COMPARE_BENCHMARK_RESULTS:BCFTOOLS_MERGE
4
COMPARE_BENCHMARK_RESULTS:VCF_TO_CSV
4
1
COMPARE_BENCHMARK_RESULTS:MERGE_SOMPY_FEATURES
REPORT_BENCHMARK_STATISTICS:MERGE_REPORTS
1
REPORT_BENCHMARK_STATISTICS:PLOTS
1
REPORT_BENCHMARK_STATISTICS:CREATE_DATAVZRD_INPUT
1
REPORT_BENCHMARK_STATISTICS:DATAVZRD
1
VARIANTBENCHMARKING:MULTIQC
1