File Info

Filename
HCC1395N_mq_metrics.txt
Full Path
s3://natera-platform-sandbox/users/abshah/test/abshah-test-5/sentieon_fastq_qc/HCC1395N_mq_metrics.txt
Size
1.8 KB
Workflow Run
abshah-test-5
Published
Jan 13, 2026 9:42 PM
#SentieonCommandLine: /opt/conda/share/sentieon-202308.03-3/libexec/driver -r human_g1k_v37_decoy.fasta -t 8 -i HCC1395N_sorted.bam --algo MeanQualityByCycle HCC1395N_mq_metrics.txt
CYCLE	MEAN_QUALITY
1	34.294800
2	35.743800
3	36.137600
4	36.689200
5	36.643600
6	38.526400
7	38.413200
8	38.676800
9	38.917600
10	38.903600
11	38.445000
12	38.574200
13	38.626200
14	38.554000
15	38.826600
16	38.696800
17	38.596800
18	38.422800
19	38.631600
20	38.653200
21	38.742600
22	38.754000
23	38.877400
24	38.810800
25	38.785400
26	38.310800
27	38.180600
28	38.580200
29	38.211400
30	38.665000
31	38.769200
32	38.793800
33	38.405600
34	38.596400
35	38.673000
36	38.539000
37	38.382600
38	38.565000
39	38.037400
40	38.151000
41	38.463000
42	38.611000
43	38.588200
44	38.533600
45	38.394400
46	38.421200
47	38.654400
48	38.433200
49	38.412400
50	38.024800
51	38.353600
52	38.413000
53	38.319000
54	38.353800
55	38.516000
56	38.345000
57	38.264200
58	38.436800
59	38.196200
60	37.763600
61	38.312800
62	37.398800
63	38.114600
64	38.237800
65	38.281600
66	37.986400
67	37.915400
68	38.124800
69	37.969400
70	37.456600
71	37.245200
72	36.576800
73	37.307800
74	37.807800
75	37.930800
76	38.079600
77	37.777600
78	37.659000
79	37.934200
80	37.712000
81	37.711600
82	37.625200
83	37.846600
84	37.658200
85	37.221800
86	37.675400
87	37.280200
88	37.446200
89	37.830400
90	37.885600
91	37.886400
92	37.828000
93	37.224600
94	37.532200
95	37.285000
96	37.520400
97	37.487600
98	37.329600
99	37.436800
100	37.206600
101	37.328600
102	35.192000
103	36.134000
104	37.245200
105	37.823600
106	37.084800
107	36.843200
108	37.350800
109	37.283400
110	36.951600
111	36.928000
112	37.287000
113	37.730000
114	37.532400
115	37.468400
116	37.574200
117	37.447000
118	37.574000
119	37.424600
120	37.241600
121	37.575400
122	37.671000
123	37.359600
124	37.065600
125	36.974800
126	34.551200