File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/0b25e9d0610de13dc76b0a7491b52f/.command.log
Size
1.4 KB
Task
EMIT_ALPHA_FEATURES (HG01513_x_HG01846_FF_5)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/0b25e9d0610de13dc76b0a7491b52f/.command.sh
  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/4c40752e3aaf860de01a0fdecbb6dd/HG01513_x_HG01846_FF_5.mix.bam
ERROR "ls s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/4c40752e3aaf860de01a0fdecbb6dd/HG01513_x_HG01846_FF_5.mix.bam": no object found
  Downloading: s3://natera-platform-sandbox/users/tdouglas/nipt_caller/adaptive_alpha_features/inputs/targets/HG01513_x_HG01846_FF_5.targets.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/0b25e9d0610de13dc76b0a7491b52f/.command.run
ERROR "cp s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/4c40752e3aaf860de01a0fdecbb6dd/HG01513_x_HG01846_FF_5.mix.bam HG01513_x_HG01846_FF_5.mix.bam": NoSuchKey: The specified key does not exist. status code: 404, request id: DJ908FN3XBS1PZR9, host id: ZeSROY8D177AvSQIasQXOhha57jU2BSH8IjUBZVotcX7m/lObcB7N1hge5dxcRNEz1H17sayFlJBIvX031QHHw==
ERROR "cp s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta Homo_sapiens_assembly38.fasta": rename ./Homo_sapiens_assembly38.fasta764829505 Homo_sapiens_assembly38.fasta: no such file or directory