File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/610a1aa08e686b57cde7c37d014ed1/.command.log
Size
1.7 KB
Task
EMIT_ALPHA_FEATURES (HG01928_x_HG01952_FF_10)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/610a1aa08e686b57cde7c37d014ed1/.command.sh
  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/users/tdouglas/nipt_caller/adaptive_alpha_features/inputs/vcfs/HG01928_x_HG01952_FF_10.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/1bd335d96dabf40ecc1958ac36624d/HG01928_x_HG01952_FF_10.mix.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/610a1aa08e686b57cde7c37d014ed1/.command.run
ERROR "ls s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/1bd335d96dabf40ecc1958ac36624d/HG01928_x_HG01952_FF_10.mix.bam": no object found
ERROR "cp s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/1bd335d96dabf40ecc1958ac36624d/HG01928_x_HG01952_FF_10.mix.bam HG01928_x_HG01952_FF_10.mix.bam": NoSuchKey: The specified key does not exist. status code: 404, request id: DECEV5H0P9R5W642, host id: onJ3mIPCI0kHKTkzOpcxAMWbWxnwp0RJ6PIYObcIWTAfDueD3YtVTjL7pYlff3lc275lYVpGdOfUo/8r2FGGkj81htn7Bc/Ev/7yEYr6DAE=
ERROR "cp s3://natera-platform-sandbox/users/tdouglas/nipt_caller/adaptive_alpha_features/inputs/vcfs/HG01928_x_HG01952_FF_10.vcf HG01928_x_HG01952_FF_10.vcf": rename ./HG01928_x_HG01952_FF_10.vcf2069998082 HG01928_x_HG01952_FF_10.vcf: no such file or directory
ERROR "cp s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta Homo_sapiens_assembly38.fasta": rename ./Homo_sapiens_assembly38.fasta2542426597 Homo_sapiens_assembly38.fasta: no such file or directory