File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/390f9f77eebf542755e60b3d02d9db/.command.log
Size
1.4 KB
Task
EMIT_ALPHA_FEATURES (HG01243_x_HG01258_FF_10)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/390f9f77eebf542755e60b3d02d9db/.command.sh
  Downloading: s3://natera-platform-sandbox/users/tdouglas/nipt_caller/adaptive_alpha_features/inputs/vcfs/HG01243_x_HG01258_FF_10.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/b65cadef432cb98abb94e013f4b129/HG01243_x_HG01258_FF_10.mix.bam
ERROR "ls s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/b65cadef432cb98abb94e013f4b129/HG01243_x_HG01258_FF_10.mix.bam": no object found
ERROR "cp s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/b65cadef432cb98abb94e013f4b129/HG01243_x_HG01258_FF_10.mix.bam HG01243_x_HG01258_FF_10.mix.bam": NoSuchKey: The specified key does not exist. status code: 404, request id: 5TNKABW6FFJF4MFC, host id: vvhwVbx6qvAn/pozvtezK4w3N0WzGBj+sCsT9vW7faLGBmyo0zFvA4O0z3RX5F3A+VZXnf6f3YI=
ERROR "cp s3://natera-platform-sandbox/users/tdouglas/nipt_caller/adaptive_alpha_features/inputs/vcfs/HG01243_x_HG01258_FF_10.vcf HG01243_x_HG01258_FF_10.vcf": rename ./HG01243_x_HG01258_FF_10.vcf3265905682 HG01243_x_HG01258_FF_10.vcf: no such file or directory
ERROR "cp s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta Homo_sapiens_assembly38.fasta": rename ./Homo_sapiens_assembly38.fasta592904478 Homo_sapiens_assembly38.fasta: no such file or directory