.command.log - Workdir - EMIT_ALPHA_FEATURES (HG01513_x_HG01846_FF_5)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/f67610b275413b946d69f9c19c46d1/.command.log
Size: 1.1 KB
Task: EMIT_ALPHA_FEATURES (HG01513_x_HG01846_FF_5)
Attempt

Content

  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/f67610b275413b946d69f9c19c46d1/.command.sh
  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/4c40752e3aaf860de01a0fdecbb6dd/HG01513_x_HG01846_FF_5.mix.bam
ERROR "ls s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/4c40752e3aaf860de01a0fdecbb6dd/HG01513_x_HG01846_FF_5.mix.bam": no object found
ERROR "cp s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/4c40752e3aaf860de01a0fdecbb6dd/HG01513_x_HG01846_FF_5.mix.bam HG01513_x_HG01846_FF_5.mix.bam": NoSuchKey: The specified key does not exist. status code: 404, request id: 8T8X15ZHQS6KDTN5, host id: kJZY0LuDFjxmZtbxK5Dciib0VARPNymN5dgtDuG8X6sU3ULGbt649tN1v/cpiAu14vEyTRnEacU=
ERROR "cp s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta Homo_sapiens_assembly38.fasta": rename ./Homo_sapiens_assembly38.fasta1003799770 Homo_sapiens_assembly38.fasta: no such file or directory