File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/0f5c448eae356f12ae8d6eb906e535/.command.log
Size
1.8 KB
Attempt
  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/0f5c448eae356f12ae8d6eb906e535/.command.sh
  Downloading: s3://natera-platform-sandbox/users/tdouglas/nipt_caller/adaptive_alpha_features/inputs/targets/HG00741_x_HG01106_FF_5.targets.tsv
  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/users/tdouglas/nipt_caller/adaptive_alpha_features/inputs/vcfs/HG00741_x_HG01106_FF_5.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/0f5c448eae356f12ae8d6eb906e535/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/e0b9a2a55a305ad75e0ac2b64191d6/HG00741_x_HG01106_FF_5.mix.bam.bai
ERROR "ls s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/e0b9a2a55a305ad75e0ac2b64191d6/HG00741_x_HG01106_FF_5.mix.bam.bai": no object found
ERROR "cp s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/e0b9a2a55a305ad75e0ac2b64191d6/HG00741_x_HG01106_FF_5.mix.bam.bai HG00741_x_HG01106_FF_5.mix.bam.bai": NoSuchKey: The specified key does not exist. status code: 404, request id: WBE5E1A8RMMP5GAQ, host id: 4D80N1pAH04IiYPLu/4uW7l73nwi4lrB6GihBeCgV0ljRotIJtxubDeSbjPMaZ5Ph1YYdN4U0lY=
ERROR "cp s3://natera-platform-sandbox/users/tdouglas/nipt_caller/adaptive_alpha_features/inputs/vcfs/HG00741_x_HG01106_FF_5.vcf HG00741_x_HG01106_FF_5.vcf": rename ./HG00741_x_HG01106_FF_5.vcf456851439 HG00741_x_HG01106_FF_5.vcf: no such file or directory
ERROR "cp s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta Homo_sapiens_assembly38.fasta": rename ./Homo_sapiens_assembly38.fasta4285327418 Homo_sapiens_assembly38.fasta: no such file or directory