.command.log - Workdir - EMIT_ALPHA_FEATURES (HG00350_x_HG00438_FF_5)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/1fba3ca31708146ac10c07ab6976fe/.command.log
Size: 1.1 KB
Task: EMIT_ALPHA_FEATURES (HG00350_x_HG00438_FF_5)
Attempt

Content

  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/1fba3ca31708146ac10c07ab6976fe/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/01ed3ce6488d83d9efee80cabd24a6/HG00350_x_HG00438_FF_5.mix.bam
  Downloading: s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta.fai
ERROR "ls s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/01ed3ce6488d83d9efee80cabd24a6/HG00350_x_HG00438_FF_5.mix.bam": no object found
ERROR "cp s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/01ed3ce6488d83d9efee80cabd24a6/HG00350_x_HG00438_FF_5.mix.bam HG00350_x_HG00438_FF_5.mix.bam": NoSuchKey: The specified key does not exist. status code: 404, request id: A51K9MAJGVDMF07B, host id: ziRGPyLcoYuXMwmfMSBSTPl4Z+2IksP7U5xnuV1/8Czwcja8YHB3AaJubI+ZLDK/gmtNRgUDn10=
ERROR "cp s3://natera-platform-sandbox/users/sgoyal/resources/GRCh38/Homo_sapiens_assembly38.fasta Homo_sapiens_assembly38.fasta": rename ./Homo_sapiens_assembly38.fasta281727032 Homo_sapiens_assembly38.fasta: no such file or directory