Error executing process > 'RECALL:EXTRACT_AIH_QC_METRICS (aih-qc)'

Caused by:
  Process `RECALL:EXTRACT_AIH_QC_METRICS (aih-qc)` terminated with an error exit status (1)


Command executed:

  extract_aih_qc_metrics.py \
      --metadata dev_rna_experiments_unified_table_2026-05-29.tsv \
      --manifest sample_manifest.tsv \
      --aih-manifest dev_rna_harmonization_latest_2026-06-04.tsv \
      --target-experiments dev_rna_exp0016,cgp_rna_exp0034 \
      --qc-rules qc_rules_default.yaml \
      --metadata-qc-output metadata_qc.tsv \
      --analysis-manifest-output analysis_manifest.tsv \
      --qc-metrics-output aih_qc_metrics.tsv \
      --audit-output aih_qc_extract_audit.tsv
  
  cat <<-END_VERSIONS > versions.yml
  "RECALL:EXTRACT_AIH_QC_METRICS":
      python: $(python --version 2>&1 | sed 's/Python //')
      extract_aih_qc_metrics: "1.0.0"
  END_VERSIONS

Command exit status:
  1

Command output:
  (empty)

Command error:
  Traceback (most recent call last):
    File "/tmp/nxf.gqsGqgIQdI/nextflow-bin/extract_aih_qc_metrics.py", line 16, in <module>
      from qc_rules import apply_qc_status, load_qc_rules
    File "/tmp/nxf.gqsGqgIQdI/nextflow-bin/qc_rules.py", line 10, in <module>
      import yaml
  ModuleNotFoundError: No module named 'yaml'

Work dir:
  s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/db09ad904ca13b59663c28872d6f88

Container:
  292967571998.dkr.ecr.us-west-2.amazonaws.com/rnafusion-performance-s3-python:1.0.0

Tip: when you have fixed the problem you can continue the execution adding the option `-resume` to the run command line