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Filename
qc_metrics.tsv
Full Path
s3://natera-platform-sandbox/platform-users/smedina/cgp_postprocess/testing_smr/altera_residuals_and_slides_v9/qc/qc_metrics.tsv
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Jun 06, 2026 9:29 AM
harmonized_s3_path local_qc_path multiqc_Custom content: Expression QC_mqc-generalstats-custom_content_expression_qc-pct_hk_est_counts multiqc_Custom content: Expression QC_mqc-generalstats-custom_content_expression_qc-pct_hk_tpm multiqc_Custom content: Expression QC_mqc-generalstats-custom_content_expression_qc-pct_male_est_counts multiqc_Custom content: Expression QC_mqc-generalstats-custom_content_expression_qc-pct_male_tpm multiqc_Custom content: Expression QC_mqc-generalstats-custom_content_expression_qc-pct_mito_est_counts multiqc_Custom content: Expression QC_mqc-generalstats-custom_content_expression_qc-pct_mito_tpm multiqc_Custom content: Expression QC_mqc-generalstats-custom_content_expression_qc-pct_ribo_est_counts multiqc_Custom content: Expression QC_mqc-generalstats-custom_content_expression_qc-pct_ribo_tpm multiqc_Custom content: Kallisto_mqc-generalstats-custom_content_kallisto-fragment_length_mean multiqc_Custom content: 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s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.47 0.72 0.0 0.0 0.01 0.02 0.76 2.33 112.9 107.0 387745605.0 9999000000.0 0.0 No 0.611956 0.739943 0.504622 0.035332 0.964668 0.045735 0.938669 0.007726 0.0 424.876729 0.973144 5022460.0 137129597.0 190.0 588455546.0 13332187.0 273629254.0 291507724.0 111.69967040466979 112 82.58089193103532 9.090909090909092 58.0 294227773.0 111.69967040466979 112 82.58089193103532 9.090909090909092 58.0 294227773.0 112.9 98.24955953427279 289077491.0 155.43559 112 0.508551 97.38289999999999 0.0 84.63507922902441 277109173.0 94.18 0.577948 63784953000.0 0.971871 588455546.0 81.27013483333333 24.729699999999998 98.07592433333333 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_9C_T1_RNA_SLD_01 tRNA 1173_9C_T1_RNA_SLD_01_A23T55JLT4_1 1173_9C clinical 2136 1 10 129 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.42 0.68 0.0 0.0 0.01 0.01 1.95 5.59 111.1 105.0 381735119.0 9999000000.0 0.0 No 0.604431 0.73208 0.508127 0.042882 0.957118 0.052349 0.931567 0.007911 0.0 396.627584 0.974775 5815016.0 129790076.0 189.0 565174502.0 14552614.0 258970123.0 277994044.0 109.75514660426064 107 82.08691516827011 9.090909090909092 53.0 282587251.0 109.75514660426064 107 82.08691516827011 9.090909090909092 53.0 282587251.0 111.1 97.89047418844808 276626000.0 140.39367 106 0.512179 97.01429999999999 0.0 83.0455095872516 263637311.0 93.29 0.534836 60317899730.0 0.973739 565174502.0 82.81798903271778 25.918799999999997 98.45157189258633 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_BEE_T1_RNA_SLD_01 tRNA 1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1 1173_BEE clinical 1571 0 5 20 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1/1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
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s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.52 0.78 0.0 0.0 0.02 0.04 1.08 3.17 113.5 106.0 380684528.0 9999000000.0 0.0 No 0.532678 0.690022 0.384133 0.030029 0.969971 0.040118 0.946597 0.008182 0.0 280.961851 0.973775 2766660.0 89366598.0 119.0 305780254.0 7555089.0 178263193.0 188320050.0 111.79166754175043 112 76.54007468064803 9.090909090909092 56.0 152890127.0 111.79166754175043 112 76.54007468064803 9.090909090909092 56.0 152890127.0 113.5 98.28354711223439 150265840.0 166.633973 112 0.387301 97.53500000000001 0.0 85.11820451406214 143621131.0 93.94 0.561282 33197572520.0 0.972583 305780254.0 79.7239754750097 16.517699999999998 98.18136715703132 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_C31_T1_RNA_SLD_01 tRNA 1173_C31_T1_RNA_SLD_01_A23T55JLT4_1 1173_C31 clinical 572 0 0 6 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.35 0.59 0.0 0.0 0.0 0.01 0.64 2.04 109.0 104.0 120488245.0 9999000000.0 0.0 No 0.424815 0.634378 0.604717 0.048666 0.951334 0.057241 0.923306 0.00769 0.0 181.216951 0.973884 3229116.0 63123123.0 69.0 345689872.0 7821723.0 126165247.0 136645184.0 108.4641352697773 107 82.92066241406351 9.090909090909092 58.0 172844936.0 108.4641352697773 107 82.92066241406351 9.090909090909092 58.0 172844936.0 109.0 98.10296380334799 169566005.0 132.691708 106 0.609403 97.10069999999999 0.0 84.38571633086504 162719632.0 94.14 0.58259 36413453121.0 0.972736 345689872.0 85.24147012230118 32.014199999999995 98.3512630444638 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_CH0_T1_RNA_SLD_01 tRNA 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2 1173_CH0 clinical 1028 0 0 29 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2/1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.35 0.59 0.0 0.0 0.0 0.01 0.64 2.04 109.0 104.0 120488245.0 9999000000.0 0.0 No 0.424815 0.634378 0.604717 0.048666 0.951334 0.057241 0.923306 0.00769 0.0 181.216951 0.973884 3229116.0 63123123.0 69.0 345689872.0 7821723.0 126165247.0 136645184.0 108.4641352697773 107 82.92066241406351 9.090909090909092 58.0 172844936.0 108.4641352697773 107 82.92066241406351 9.090909090909092 58.0 172844936.0 109.0 98.10296380334799 169566005.0 132.691708 106 0.609403 97.10069999999999 0.0 84.38571633086504 162719632.0 94.14 0.58259 36413453121.0 0.972736 345689872.0 85.24147012230118 32.014199999999995 98.3512630444638 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_CH0_T1_RNA_SLD_01 tRNA 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1 1173_CH0 clinical 164 0 0 10 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1/1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
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s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 1173_GZ1_T1_RNA_SLD_01 tRNA 1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1 1173_GZ1 clinical 43 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1/1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.34 0.54 0.0 0.0 0.01 0.02 0.68 2.17 115.1 108.0 230091914.0 9999000000.0 0.04 Yes 0.626353 0.766883 0.574719 0.038793 0.961207 0.049646 0.928687 0.009214 0.0 349.67774 0.973613 4482171.0 111059402.0 187.0 560658426.0 11837420.0 221433753.0 238437358.0 114.3694538820683 112 83.7057829575123 9.090909090909092 56.0 280329213.0 114.3694538820683 112 83.7057829575123 9.090909090909092 56.0 280329213.0 115.1 98.39204271586209 275821639.0 170.990581 116 0.580064 97.4205 0.0 85.28223122790523 264001606.0 94.18 0.560096 62271653780.0 0.9724 560658426.0 78.69776654312884 31.985000000000003 98.21741358113411 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_GZ1_T1_RNA_SLD_01 tRNA 1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2 1173_GZ1 clinical 1749 2 0 7 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2/1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.36 0.54 0.0 0.0 0.01 0.02 0.76 2.29 128.2 119.0 485980051.0 9999000000.0 0.0 No 0.655745 0.77343 0.457683 0.033542 0.966458 0.046913 0.937562 0.008419 0.0 522.153515 0.971443 5216481.0 150304443.0 250.0 588162284.0 14963985.0 299054720.0 318970661.0 121.56006516051954 127 82.3077249074266 9.090909090909092 57.0 294081142.0 121.56006516051954 127 82.3077249074266 9.090909090909092 57.0 294081142.0 128.2 98.16961163732151 288698315.0 224.300163 132 0.461569 97.06620000000001 0.0 87.64318418565145 279277726.0 94.97 0.568572 69291577437.0 0.970164 588162284.0 68.78816016666667 26.417099999999998 98.02704733333333 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_H2E_T1_RNA_SLD_01 tRNA 1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2 1173_H2E clinical 1871 0 0 36 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2/1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.36 0.54 0.0 0.0 0.01 0.02 0.76 2.29 128.2 119.0 485980051.0 9999000000.0 0.0 No 0.655745 0.77343 0.457683 0.033542 0.966458 0.046913 0.937562 0.008419 0.0 522.153515 0.971443 5216481.0 150304443.0 250.0 588162284.0 14963985.0 299054720.0 318970661.0 121.56006516051954 127 82.3077249074266 9.090909090909092 57.0 294081142.0 121.56006516051954 127 82.3077249074266 9.090909090909092 57.0 294081142.0 128.2 98.16961163732151 288698315.0 224.300163 132 0.461569 97.06620000000001 0.0 87.64318418565145 279277726.0 94.97 0.568572 69291577437.0 0.970164 588162284.0 68.78816016666667 26.417099999999998 98.02704733333333 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_H2E_T1_RNA_SLD_01 tRNA 1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1 1173_H2E clinical 1648 0 0 39 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1/1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.66 0.94 0.0 0.0 0.01 0.02 1.25 3.52 113.1 106.0 348178125.0 9999000000.0 0.0 Yes 0.538336 0.681046 0.478141 0.032246 0.967754 0.043723 0.941314 0.007809 0.0 366.578012 0.971888 3904241.0 117174205.0 126.0 475785136.0 10856013.0 233721536.0 248292868.0 111.68611561669299 112 81.72489430237331 9.090909090909092 59.0 237892568.0 111.68611561669299 112 81.72489430237331 9.090909090909092 59.0 237892568.0 113.1 98.01217581542943 233163682.0 170.451625 113 0.481904 97.7 0.0 82.44005031604749 222316119.0 93.45 0.589746 51486515866.0 0.970558 475785136.0 80.29416672789063 22.095100000000002 97.97448454678509 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_HOB_T1_RNA_SLD_01 tRNA 1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1 1173_HOB clinical 1972 1 15 26 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.66 0.94 0.0 0.0 0.01 0.02 1.25 3.52 113.1 106.0 348178125.0 9999000000.0 0.0 Yes 0.538336 0.681046 0.478141 0.032246 0.967754 0.043723 0.941314 0.007809 0.0 366.578012 0.971888 3904241.0 117174205.0 126.0 475785136.0 10856013.0 233721536.0 248292868.0 111.68611561669299 112 81.72489430237331 9.090909090909092 59.0 237892568.0 111.68611561669299 112 81.72489430237331 9.090909090909092 59.0 237892568.0 113.1 98.01217581542943 233163682.0 170.451625 113 0.481904 97.7 0.0 82.44005031604749 222316119.0 93.45 0.589746 51486515866.0 0.970558 475785136.0 80.29416672789063 22.095100000000002 97.97448454678509 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_HOB_T1_RNA_SLD_01 tRNA 1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2 1173_HOB clinical 1671 1 11 14 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
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s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.56 0.85 0.0 0.0 0.01 0.03 1.49 4.39 126.7 117.0 630378555.0 9999000000.0 0.09 Yes 0.633048 0.743488 0.439763 0.02886 0.97114 0.041253 0.947896 0.006079 0.0 558.105332 0.9742 4686734.0 157707626.0 244.0 590787476.0 13654111.0 313735638.0 330981188.0 120.04191775047039 122 82.5816568581307 9.090909090909092 53.0 295393738.0 120.04191775047039 122 82.5816568581307 9.090909090909092 53.0 295393738.0 126.7 98.40767172931743 290690100.0 272.254292 133 0.442452 97.7604 0.0 89.66314675395431 282729065.0 95.71 0.532583 68954177514.0 0.973179 590787476.0 69.24443616666667 25.2205 98.46457933333333 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_NWE_T1_RNA_SLD_01 tRNA 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1 1173_NWE clinical 2290 1 38 245 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1/1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.56 0.85 0.0 0.0 0.01 0.03 1.49 4.39 126.7 117.0 630378555.0 9999000000.0 0.09 Yes 0.633048 0.743488 0.439763 0.02886 0.97114 0.041253 0.947896 0.006079 0.0 558.105332 0.9742 4686734.0 157707626.0 244.0 590787476.0 13654111.0 313735638.0 330981188.0 120.04191775047039 122 82.5816568581307 9.090909090909092 53.0 295393738.0 120.04191775047039 122 82.5816568581307 9.090909090909092 53.0 295393738.0 126.7 98.40767172931743 290690100.0 272.254292 133 0.442452 97.7604 0.0 89.66314675395431 282729065.0 95.71 0.532583 68954177514.0 0.973179 590787476.0 69.24443616666667 25.2205 98.46457933333333 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_NWE_T1_RNA_SLD_01 tRNA 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2 1173_NWE clinical 2379 1 40 248 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2/1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 1173_OHF_T1_RNA_SLD_01 tRNA 1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1 1173_OHF clinical 11 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1/1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.27 0.47 0.0 0.0 0.01 0.01 1.06 3.36 112.1 106.0 291940231.0 9999000000.0 0.65 Yes 0.599514 0.738118 0.48114 0.040143 0.959857 0.049111 0.935337 0.008069 0.0 340.054575 0.974278 4693910.0 112237018.0 171.0 461947406.0 11771296.0 224187033.0 239685830.0 110.4998501799142 107 76.127371836837 9.090909090909092 54.0 230973703.0 110.4998501799142 107 76.127371836837 9.090909090909092 54.0 230973703.0 112.1 98.14862863414369 226697522.0 140.024077 108 0.485054 97.3302 0.0 86.16597103738806 218213184.0 94.48 0.54448 49590101294.0 0.972973 461947406.0 82.74845522581028 23.3903 98.14067886614029 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_PCB_T1_RNA_SLD_01 tRNA 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1 1173_PCB clinical 515 1 4 19 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1/1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.27 0.47 0.0 0.0 0.01 0.01 1.06 3.36 112.1 106.0 291940231.0 9999000000.0 0.65 Yes 0.599514 0.738118 0.48114 0.040143 0.959857 0.049111 0.935337 0.008069 0.0 340.054575 0.974278 4693910.0 112237018.0 171.0 461947406.0 11771296.0 224187033.0 239685830.0 110.4998501799142 107 76.127371836837 9.090909090909092 54.0 230973703.0 110.4998501799142 107 76.127371836837 9.090909090909092 54.0 230973703.0 112.1 98.14862863414369 226697522.0 140.024077 108 0.485054 97.3302 0.0 86.16597103738806 218213184.0 94.48 0.54448 49590101294.0 0.972973 461947406.0 82.74845522581028 23.3903 98.14067886614029 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_PCB_T1_RNA_SLD_01 tRNA 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2 1173_PCB clinical 1358 1 6 62 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2/1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.32 0.48 0.0 0.0 0.0 0.01 0.91 2.83 115.5 109.0 369292620.0 9999000000.0 0.0 Yes 0.591348 0.713204 0.468592 0.037449 0.962551 0.048061 0.936207 0.008361 0.0 393.833595 0.973594 4782767.0 122929749.0 180.0 493511196.0 12604136.0 245525383.0 262255556.0 114.55059111972001 117 81.69276681717392 9.090909090909092 54.0 246755598.0 114.55059111972001 117 81.69276681717392 9.090909090909092 54.0 246755598.0 115.5 98.29030383335011 242536827.0 164.260275 115 0.472543 97.0722 0.0 86.69074764366206 233303573.0 94.55 0.53771 54888086477.0 0.972391 493511196.0 78.22505884106033 24.5197 97.92993202673917 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_Q7O_T1_RNA_SLD_01 tRNA 1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2 1173_Q7O clinical 1748 0 0 23 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2/1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
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s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.62 0.88 0.0 0.0 0.01 0.02 1.38 3.94 102.4 97.0 183787634.0 9999000000.0 0.0 No 0.512781 0.654241 0.630328 0.03955 0.96045 0.048535 0.932359 0.007063 0.0 268.780762 0.97521 3973160.0 96486050.0 108.0 559664924.0 10041529.0 192898054.0 206892507.0 103.28681176381887 102 83.04818948487595 9.090909090909092 53.0 279832462.0 103.28681176381887 102 83.04818948487595 9.090909090909092 53.0 279832462.0 102.4 98.47201573061241 275556666.0 130.948582 99 0.634812 97.8962 0.0 86.96070800563052 265895484.0 95.02 0.536805 56211904345.0 0.974169 559664924.0 88.88322450706225 28.5385 98.30109879799852 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_RPC_T1_RNA_SLD_01 tRNA 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1 1173_RPC clinical 85 0 0 3 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1/1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.62 0.88 0.0 0.0 0.01 0.02 1.38 3.94 102.4 97.0 183787634.0 9999000000.0 0.0 No 0.512781 0.654241 0.630328 0.03955 0.96045 0.048535 0.932359 0.007063 0.0 268.780762 0.97521 3973160.0 96486050.0 108.0 559664924.0 10041529.0 192898054.0 206892507.0 103.28681176381887 102 83.04818948487595 9.090909090909092 53.0 279832462.0 103.28681176381887 102 83.04818948487595 9.090909090909092 53.0 279832462.0 102.4 98.47201573061241 275556666.0 130.948582 99 0.634812 97.8962 0.0 86.96070800563052 265895484.0 95.02 0.536805 56211904345.0 0.974169 559664924.0 88.88322450706225 28.5385 98.30109879799852 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_RPC_T1_RNA_SLD_01 tRNA 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2 1173_RPC clinical 1474 0 0 13 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2/1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.5 0.77 0.0 0.0 0.02 0.04 1.13 3.31 111.2 106.0 369972839.0 9999000000.0 0.0 No 0.589223 0.712452 0.514996 0.034256 0.965744 0.044181 0.941262 0.00706 0.0 414.421193 0.973001 4783882.0 134868330.0 177.0 589678722.0 12635741.0 269197911.0 285996753.0 111.46385016415769 112 82.33508253065503 9.090909090909092 55.0 294839361.0 111.46385016415769 112 82.33508253065503 9.090909090909092 55.0 294839361.0 111.2 98.40890782557354 290148195.0 156.362806 111 0.518657 97.5704 0.0 84.98349922589537 278166240.0 94.35 0.554347 63788408549.0 0.971856 589678722.0 82.59509266666667 25.6756 98.279787 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_RPX_T1_RNA_SLD_01 tRNA 1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1 1173_RPX clinical 1920 0 0 9 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1/1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.54 0.86 0.0 0.0 0.01 0.01 0.87 2.69 106.0 101.0 77981001.0 9999000000.0 0.0 No 0.288097 0.539895 0.767916 0.070819 0.929181 0.079639 0.882602 0.008763 0.0 106.406468 0.971577 2970596.0 38975830.0 37.0 381193030.0 7045580.0 78082724.0 88468794.0 107.45639137735546 107 86.2974618358316 9.090909090909092 58.0 190596515.0 107.45639137735546 107 86.2974618358316 9.090909090909092 58.0 190596515.0 106.0 97.77577255281923 186357215.0 147.488993 108 0.774705 96.6899 0.0 83.66424795448577 179341276.0 94.09 0.583598 39658577874.0 0.970117 381193030.0 86.30830129829104 40.1216 97.74440908167807 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_RQT_T1_RNA_SLD_01 tRNA 1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1 1173_RQT clinical 1548 0 0 16 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1/1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
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s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.38 0.61 0.0 0.0 0.01 0.01 0.63 2.03 98.8 95.0 149938835.0 9999000000.0 0.0 No 0.491492 0.679312 0.689307 0.048717 0.951283 0.05657 0.921201 0.006906 0.0 225.686877 0.97351 4333210.0 84613447.0 95.0 591418434.0 10394759.0 169270249.0 183749541.0 101.40332955194968 97 85.04698450848409 9.090909090909092 56.0 295709217.0 101.40332955194968 97 85.04698450848409 9.090909090909092 56.0 295709217.0 98.8 98.47711375191935 291205902.0 129.246376 99 0.694101 97.7097 0.0 86.83781196372365 281602627.0 95.23 0.564885 58221649658.0 0.972536 591418434.0 90.99672266666666 30.359199999999998 98.569739 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_SDP_T1_RNA_SLD_01 tRNA 1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1 1173_SDP clinical 1504 0 0 12 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1/1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 1173_SFA_T1_RNA_SLD_01 tRNA 1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1 1173_SFA clinical 354 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1/1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.41 0.62 0.0 0.0 0.01 0.03 1.02 2.99 123.5 116.0 410428532.0 9999000000.0 0.0 No 0.625115 0.760043 0.407732 0.029732 0.970268 0.041554 0.944177 0.008451 0.0 390.565057 0.973441 3513201.0 114649757.0 198.0 408413764.0 10051521.0 228387373.0 241890484.0 119.11408354004445 122 80.27817159330624 9.090909090909092 55.0 204206882.0 119.11408354004445 122 80.27817159330624 9.090909090909092 55.0 204206882.0 123.5 98.0742798864144 200274429.0 203.813231 125 0.411207 97.3464 0.0 86.09967567211048 192899375.0 94.46 0.551439 47239473922.0 0.972183 408413764.0 72.30255502403725 22.6579 98.08237173741331 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_SK8_T1_RNA_SLD_01 tRNA 1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1 1173_SK8 clinical 2032 2 4 124 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.41 0.62 0.0 0.0 0.01 0.03 1.02 2.99 123.5 116.0 410428532.0 9999000000.0 0.0 No 0.625115 0.760043 0.407732 0.029732 0.970268 0.041554 0.944177 0.008451 0.0 390.565057 0.973441 3513201.0 114649757.0 198.0 408413764.0 10051521.0 228387373.0 241890484.0 119.11408354004445 122 80.27817159330624 9.090909090909092 55.0 204206882.0 119.11408354004445 122 80.27817159330624 9.090909090909092 55.0 204206882.0 123.5 98.0742798864144 200274429.0 203.813231 125 0.411207 97.3464 0.0 86.09967567211048 192899375.0 94.46 0.551439 47239473922.0 0.972183 408413764.0 72.30255502403725 22.6579 98.08237173741331 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_SK8_T1_RNA_SLD_01 tRNA 1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2 1173_SK8 clinical 1618 2 6 116 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2/1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.29 0.49 0.0 0.0 0.0 0.0 0.93 2.98 106.8 101.0 96735325.0 9999000000.0 0.0 No 0.345819 0.573001 0.782758 0.053459 0.946541 0.064069 0.898965 0.00803 0.0 148.845732 0.973957 3000221.0 53121844.0 46.0 544744504.0 7582049.0 106384653.0 118341229.0 108.06575869923783 107 86.46350334350677 18.181818181818183 56.0 272372252.0 108.06575869923783 107 86.46350334350677 18.181818181818183 56.0 272372252.0 106.8 98.33043859401654 267824830.0 155.982572 108 0.789095 97.4893 0.0 84.4962910569478 256890509.0 94.32 0.563416 57140025495.0 0.972496 544744504.0 84.89440978807151 48.1955 97.90985099686804 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_T46_T1_RNA_SLD_01 tRNA 1173_T46_T1_RNA_SLD_01_A23T55JLT4_1 1173_T46 clinical 1740 1 21 54 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_T46_T1_RNA_SLD_01_A23T55JLT4_1/1173_T46_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.29 0.49 0.0 0.0 0.0 0.0 0.93 2.98 106.8 101.0 96735325.0 9999000000.0 0.0 No 0.345819 0.573001 0.782758 0.053459 0.946541 0.064069 0.898965 0.00803 0.0 148.845732 0.973957 3000221.0 53121844.0 46.0 544744504.0 7582049.0 106384653.0 118341229.0 108.06575869923783 107 86.46350334350677 18.181818181818183 56.0 272372252.0 108.06575869923783 107 86.46350334350677 18.181818181818183 56.0 272372252.0 106.8 98.33043859401654 267824830.0 155.982572 108 0.789095 97.4893 0.0 84.4962910569478 256890509.0 94.32 0.563416 57140025495.0 0.972496 544744504.0 84.89440978807151 48.1955 97.90985099686804 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1173_T46_T1_RNA_SLD_01 tRNA 1173_T46_T1_RNA_SLD_01_A23T55JLT4_2 1173_T46 clinical 1581 1 14 34 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_T46_T1_RNA_SLD_01_A23T55JLT4_2/1173_T46_T1_RNA_SLD_01_A23T55JLT4_2.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 0.76 1.09 0.0 0.0 0.01 0.01 1.71 4.92 175.8 158.0 531926337.0 9999000000.0 62.05 Yes 0.623105 0.719071 0.409671 0.021475 0.978525 0.043778 0.945788 0.006159 0.0 729.006164 0.972208 3654097.0 166504100.0 298.0 588609644.0 15211665.0 328636355.0 347473501.0 136.83895564918743 151 84.71005376531532 9.090909090909092 54.0 294304822.0 136.83895564918743 151 84.71005376531532 9.090909090909092 54.0 294304822.0 175.8 98.26255955806256 289191451.0 932.459799 315 0.41221 97.6481 0.0 90.20313567252451 282298648.0 95.92 0.540505 78182985721.0 0.97106 588609644.0 38.952271833333334 29.828 98.10160733333333 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt FFPE_HD789_01_RNA_13 RNA FFPE_HD789_01_RNA_13_A23T55JLT4_1 Hoz_FFPE_HD789_0001 contrived 5270 2 32 196 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/FFPE_HD789_01_RNA_13_A23T55JLT4_1/FFPE_HD789_01_RNA_13_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 NTC_0001_0001 NTC NTC_0001_0001_A23T55JLT4_1 NTC_0001 contrived 0 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/NTC_0001_0001_A23T55JLT4_1/NTC_0001_0001_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 1.18 1.62 0.0 0.0 0.01 0.01 1.8 4.9 160.2 146.0 287762206.0 9999000000.0 0.0 No 0.522244 0.598416 0.523322 0.02979 0.97021 0.052124 0.93254 0.007311 0.0 541.37458 0.972045 4066066.0 132423352.0 135.0 587997246.0 14609510.0 261377061.0 280285138.0 133.67339847370647 151 86.43001074446106 9.090909090909092 54.0 293998623.0 133.67339847370647 151 86.43001074446106 9.090909090909092 54.0 293998623.0 160.2 97.4073735712701 286376337.0 590.260262 224 0.527176 96.82809999999999 0.0 89.49011085657628 280985506.0 95.57 0.541744 76255116299.0 0.970728 587997246.0 45.674301166666666 37.4396 97.99954100000001 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt FFPE_V4_0002_RNA_0001 RNA FFPE_V4_0002_RNA_0001_A23T55JLT4_1 SS_FFPE_V4_0002 contrived 3232 15 42 50 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/FFPE_V4_0002_RNA_0001_A23T55JLT4_1/FFPE_V4_0002_RNA_0001_A23T55JLT4_1.summary.json
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s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 659_yF_T1_TRNA_1 tRNA 659_yF_T1_TRNA_1_B2372Y3LT4_1 659_yF clinical 2136 1 10 129 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
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s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 659_z2_T1_TRNA_1 tRNA 659_z2_T1_TRNA_1_B2372Y3LT4_1 659_z2 clinical 2136 1 10 129 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt 659_zC_T1_TRNA_1 tRNA 659_zC_T1_TRNA_1_B2372Y3LT4_1 659_zC clinical 2136 1 10 129 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt FFPE_HD789_01_RNA_0012 RNA FFPE_HD789_01_RNA_0012_B2372Y3LT4_2 Hoz_FFPE_HD789_0001 contrived 2136 1 10 129 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt FFPE_HD789_01_RNA_0012 RNA FFPE_HD789_01_RNA_0012_B2372Y3LT4_1 Hoz_FFPE_HD789_0001 contrived 2136 1 10 129 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt FFPE_V4_0001_RNA_0001 RNA FFPE_V4_0001_RNA_0001_B2372Y3LT4_1 SS_FFPE_V4_0001 contrived 2136 1 10 129 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204 s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/multiqc/multiqc_data/multiqc_general_stats.txt FFPE_V4_0001_RNA_0001 RNA FFPE_V4_0001_RNA_0001_B2372Y3LT4_2 SS_FFPE_V4_0001 contrived 2136 1 10 129 s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_rna/hmnz_dev_rna_exp0016__2fc4034--20260601-114101/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1/1173_9C_T1_RNA_SLD_01_A23T55JLT4_1.summary.json
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