Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/348137e81738c4ba8828bf8a2a7405/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/c98528a6cc9020b18146f1b7d5992c/analysis_manifest.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-1878a8d8-916b-4b35-b1fa-7f540a23a9eb/a5/133a8a7209fe5f16428a109fc46b17/dev_rna_experiments_unified_table_2026-05-29.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/1647375fc4ea979c9c347eef102bd3/test_harmonized_calls.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/a5f7c17419c7c7226bf1a4628b41e2/qc_metrics.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/82229be1d3f213452a481246c25dbe/alt_truth_harmonized_calls.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/348137e81738c4ba8828bf8a2a7405/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/269842f7100ea88213b668c553ad97/truth_harmonized_calls.tsv
==> STAGING COMPLETE (8 inputs)

Wrote 76 patient IDs to patient_id_list.txt