.command.log - Workdir - SENTIEON_ALIGN_QC (test_sample_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/05307ec3cbe8eee03a21e5445bbade/.command.log
Size: 1.4 KB
Task: SENTIEON_ALIGN_QC (test_sample_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-test-resources/references/igenomes/Homo_sapiens/GATK/GRCh37/Sequence/BWAIndex/human_g1k_v37_decoy.fasta.amb
  Downloading: s3://natera-rnd-pltf-dev-test-resources/references/igenomes/Homo_sapiens/GATK/GRCh37/Sequence/WholeGenomeFasta/human_g1k_v37_decoy.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/05307ec3cbe8eee03a21e5445bbade/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-test-resources/fixtures/ngi-igenomes/test-data/sarek/SRR7890919_WES_HCC1395BL-EA_normal_1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-test-resources/references/igenomes/Homo_sapiens/GATK/GRCh37/Sequence/WholeGenomeFasta/human_g1k_v37_decoy.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-test-resources/references/igenomes/Homo_sapiens/GATK/GRCh37/Sequence/BWAIndex/human_g1k_v37_decoy.fasta.ann
  Downloading: s3://natera-rnd-pltf-dev-test-resources/references/igenomes/Homo_sapiens/GATK/GRCh37/Sequence/BWAIndex/human_g1k_v37_decoy.fasta.bwt
  Downloading: s3://natera-rnd-pltf-dev-test-resources/references/igenomes/Homo_sapiens/GATK/GRCh37/Sequence/BWAIndex/human_g1k_v37_decoy.fasta.pac
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/05307ec3cbe8eee03a21e5445bbade/.command.run
  Downloading: s3://natera-rnd-pltf-dev-test-resources/references/igenomes/Homo_sapiens/GATK/GRCh37/Sequence/BWAIndex/human_g1k_v37_decoy.fasta.sa