succeeded NFCORE_SAREK:PREPARE_INTERVALS:CREATE_INTERVALS_BED (xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed) 7s 3s - - 5.3 MB 102% 4.6 MB 4.6 MB 0 bytes 4.6 MB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_COMBINED (xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity;null) 3s 2s 1s 0s 6.3 MB 109% 6.0 MB 1.7 MB 0 bytes 1.7 MB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr14_64122012-64122133;null) 4s 3s - - 6.1 MB 97% 1.5 MB 401.1 KB 0 bytes 408.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_69091-70008;null) 5s 3s - - 6.1 MB 102% 1.6 MB 442.7 KB 0 bytes 448.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr19_47340800-47341813;null) 4s 3s - - 3.3 MB 126% 392.1 KB 84.1 KB 0 bytes 88.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr4_30730753-30730788;null) 4s 3s - - 6.0 MB 94% 1.4 MB 422.1 KB 0 bytes 428.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr8_93795409-93795507;null) 4s 2s - - 6.1 MB 94% 1.6 MB 432.2 KB 0 bytes 440.0 KB 1
succeeded NFCORE_SAREK:PREPARE_REFERENCE_CNVKIT:CNVKIT_ANTITARGET (intervals) 28s 19s 8s 1s 257.7 MB 384% 117.1 MB 1.4 MB 0 bytes 1.4 MB 1
succeeded NFCORE_SAREK:PREPARE_REFERENCE_CNVKIT:CNVKIT_REFERENCE (Homo_sapiens_assembly38.fasta) 1m 19s 14s 56s 9s 272.3 MB 140% 5.9 GB 10.5 MB 0 bytes 10.5 MB 1
succeeded NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet) 6s 5s 0s 0s 0 bytes 107% 113.9 KB 45.4 KB 0 bytes 48.0 KB 1
succeeded NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation) 42s 17s 0s 24s 17.4 MB 101% 21.6 MB 180.0 KB 0 bytes 132.0 KB 1
succeeded NFCORE_SAREK:SAREK:AIH_CNV:CalcPanelCoverage (aih_cnv_cohort_calc_panel_coverage_1029_4PQ) 13m 45s 3s 12m 17s 1m 24s 819.0 MB 225% 282.2 GB 260.8 GB 0 bytes 17.8 GB 1
succeeded NFCORE_SAREK:SAREK:AIH_CNV:CalcPanelCoverage (aih_cnv_cohort_calc_panel_coverage_1029_BFGZ) 16m 32s 3s 14m 35s 1m 53s 888.2 MB 224% 349.3 GB 323.0 GB 0 bytes 22.0 GB 1
succeeded NFCORE_SAREK:SAREK:AIH_CNV:CalcPanelCoverage (aih_cnv_cohort_calc_panel_coverage_1029_BG65) 22m 55s 3s 20m 10s 2m 41s 955.7 MB 220% 514.8 GB 476.3 GB 0 bytes 32.6 GB 1
succeeded NFCORE_SAREK:SAREK:AIH_CNV:CalcPanelCoverage (aih_cnv_cohort_calc_panel_coverage_1029_BHOU) 21m 46s 3s 19m 13s 2m 29s 951.1 MB 220% 494.6 GB 458.8 GB 0 bytes 31.5 GB 1
succeeded NFCORE_SAREK:SAREK:AIH_CNV:CalcPanelCoverage (aih_cnv_cohort_calc_panel_coverage_1029_BS9T) 14m 44s 12s 13m 30s 1m 1s 3.3 GB 210% 379.4 GB 351.5 GB 0 bytes 24.1 GB 1
succeeded NFCORE_SAREK:SAREK:AIH_CNV:CalcPanelCoverage (aih_cnv_cohort_calc_panel_coverage_1029_BSVB) 8m 5s 4s 7m 6s 54s 5.1 GB 234% 141.3 GB 128.3 GB 0 bytes 8.9 GB 1
succeeded NFCORE_SAREK:SAREK:AIH_CNV:CalcPanelCoverage (aih_cnv_cohort_calc_panel_coverage_1029_BTAF) 17m 37s 3s 15m 34s 1m 59s 2.5 GB 220% 375.3 GB 347.1 GB 0 bytes 23.8 GB 1
succeeded NFCORE_SAREK:SAREK:AIH_CNV:CalcPanelCoverage (aih_cnv_cohort_calc_panel_coverage_1029_BTN7) 22m 38s 3s 21m 1s 1m 33s 968.7 MB 234% 545.3 GB 505.2 GB 6.7 MB 34.6 GB 1
succeeded NFCORE_SAREK:SAREK:AIH_CNV:CalcPanelCoverage (aih_cnv_cohort_calc_panel_coverage_1029_HWM) 22m 5s 4s 19m 28s 2m 32s 959.4 MB 223% 494.0 GB 457.6 GB 0 bytes 31.4 GB 1
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