NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (NA12878_c_0002_gDNA_0005_B23KYWJLT4_1) - autorun-sarek-cgp_atx_experiments-chunk1 - Workflow Tracker

Runs
autorun-sare..ents-chunk1
Tasks
CONPAIR_PILEUP (NA12878_c_0002_gDNA_0005_B23KYWJLT4_1)

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Task Info

Status: aborted
Hash: dfa1fedb1e49
Process: NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP
Tag: NA12878_c_0002_gDNA_0005_B23KYWJLT4_1
Attempts: 3

Attempt 3

Execution

Status: aborted
Hash: 42/d4a6b3
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/d4a6b3d105e1aea0e44783b9b57f1f
Native ID: nf-42d4a6b3d105e1aea0e44783b9b57f1f-835f3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 24.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Mar 02, 2026 3:04:57 PM
Completed: Mar 02, 2026 3:05:04 PM
Total Duration: -

Phases

Queue: 2409h 54m
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: failed
Hash: a9/9f6fae
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/9f6faec59237185413860f6b5595a0
Native ID: nf-a99f6faec59237185413860f6b5595a0-1a7b6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ca8d072eed2b9827 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:03:56 PM
Completed: Mar 02, 2026 3:04:32 PM
Total Duration: 35s

Phases

Queue: 26s
Execution: 9s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: a4/9bde79
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/9bde790092523fb1c941113b29e08c
Native ID: nf-a49bde790092523fb1c941113b29e08c-7a047

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-06d54586bde3f4650 ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:15 PM
Completed: Mar 02, 2026 3:03:01 PM
Total Duration: 45s

Phases

Queue: 37s
Execution: 8s
Stage/Unstage: 0s