NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (NA12878_c_0002_gDNA_0003_B23KYWJLT4_1;chr19_47340800-47341813.bed) - autorun-sarek-cgp_atx_experiments-chunk2 - Workflow Tracker

Runs
autorun-sare..ents-chunk2
Tasks
STRELKA_SINGLE (NA12878_c_0002_gDNA_0003_B23KYWJLT4_1;chr19_47340800-47341813.bed)

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Task Info

Status: new
Hash: 90a168d86873
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE
Tag: NA12878_c_0002_gDNA_0003_B23KYWJLT4_1;chr19_47340800-47341813.bed
Attempts: 2

Attempt 2

Execution

Status: new
Hash: b2/9ab335
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/strelka:2.9.10--h9ee0642_1
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/9ab335bb7a4150a94a2f3b52be68db

View Workdir

Resources

CPU (used / alloc): - / 24
Memory (peak / alloc): - / 192.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: -
Completed: -
Total Duration: -

Phases

Queue: -
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: failed
Hash: 0e/aab708
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/strelka:2.9.10--h9ee0642_1
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/aab70809f433716186077e4a7583ca
Native ID: nf-0eaab70809f433716186077e4a7583ca-dc2df

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 12
Memory (peak / alloc): - / 96.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0906a93fbba954310 ( spot)

Runtime

Submitted: Mar 02, 2026 3:04:00 PM
Completed: Mar 02, 2026 3:04:13 PM
Total Duration: 12s

Phases

Queue: 4s
Execution: 8s
Stage/Unstage: 0s