NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1) - autorun-sarek-cgp_atx_experiments-chunk2 - Workflow Tracker

Runs
autorun-sare..ents-chunk2
Tasks
SAMTOOLS_STATS (FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1)

Login

Task Info

Status: failed
Hash: b23014f213a0
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS
Tag: FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1
Attempts: 3

Attempt 3

Execution

Status: failed
Hash: ad/a43ebf
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/a43ebf04212bb71045dc8ebecd2ddc
Native ID: nf-ada43ebf04212bb71045dc8ebecd2ddc-1db5b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 24.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-038aa5d7ea1697978 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:03:58 PM
Completed: Mar 02, 2026 3:04:33 PM
Total Duration: 34s

Phases

Queue: 26s
Execution: 8s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: b0/c381a2
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/c381a2101dd07605dce865b3431840
Native ID: nf-b0c381a2101dd07605dce865b3431840-6cb1d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0f88ba919170509b8 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:02:58 PM
Completed: Mar 02, 2026 3:03:20 PM
Total Duration: 21s

Phases

Queue: 13s
Execution: 8s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: d9/243c08
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/243c087ff58649bbb05582e52a94e5
Native ID: nf-d9243c087ff58649bbb05582e52a94e5-8a1f6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-06d3e23c48af7c19d ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:14 PM
Completed: Mar 02, 2026 3:02:28 PM
Total Duration: 13s

Phases

Queue: 5s
Execution: 8s
Stage/Unstage: 0s