NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (NA12878_c_0002_gDNA_0003_B23KYWJLT4_1) - autorun-sarek-cgp_atx_experiments-chunk2 - Workflow Tracker

Runs
autorun-sare..ents-chunk2
Tasks
SAMTOOLS_STATS (NA12878_c_0002_gDNA_0003_B23KYWJLT4_1)

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Task Info

Status: failed
Hash: f22d139b4bf0
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS
Tag: NA12878_c_0002_gDNA_0003_B23KYWJLT4_1
Attempts: 3

Attempt 3

Execution

Status: failed
Hash: c3/336a1a
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/336a1a10f88e5c21ebc1135980fd7e
Native ID: nf-c3336a1a10f88e5c21ebc1135980fd7e-8b546

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 24.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ca8d072eed2b9827 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:03:57 PM
Completed: Mar 02, 2026 3:04:34 PM
Total Duration: 36s

Phases

Queue: 25s
Execution: 11s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: df/46f0c2
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/46f0c2710f18291d3a772e8fbe1ba9
Native ID: nf-df46f0c2710f18291d3a772e8fbe1ba9-60a6e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0d94305c07c7ec0b3 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:02:58 PM
Completed: Mar 02, 2026 3:03:13 PM
Total Duration: 14s

Phases

Queue: 6s
Execution: 8s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: de/c205bc
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/de/c205bc79125c8467bff1b5b3458f6c
Native ID: nf-dec205bc79125c8467bff1b5b3458f6c-24c63

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-016d287992b7c5829 ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:14 PM
Completed: Mar 02, 2026 3:02:28 PM
Total Duration: 13s

Phases

Queue: 2s
Execution: 11s
Stage/Unstage: 0s