NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1;SNP_GRCh38_hg38_wChr) - autorun-sarek-cgp_atx_experiments-chunk2 - Workflow Tracker

Runs
autorun-sare..ents-chunk2
Tasks
BCFTOOLS_MPILEUP (FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1;SNP_GRCh38_hg38_wChr)

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Task Info

Status: failed
Hash: fe37491d293e
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1;SNP_GRCh38_hg38_wChr
Attempts: 3

Attempt 3

Execution

Status: failed
Hash: 94/e492ad
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/e492ad578b2b3cdc4189365f404e67
Native ID: nf-94e492ad578b2b3cdc4189365f404e67-1ded6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 6.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Mar 02, 2026 3:04:02 PM
Completed: Mar 02, 2026 3:04:40 PM
Total Duration: 37s

Phases

Queue: 28s
Execution: 9s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: 00/658481
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/00/65848168e55acbd260f466c60ee12b
Native ID: nf-0065848168e55acbd260f466c60ee12b-f6f98

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 4.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0d187c71d45168f2a ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:03:02 PM
Completed: Mar 02, 2026 3:03:49 PM
Total Duration: 46s

Phases

Queue: 38s
Execution: 8s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: 22/e4b536
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/e4b536892294b57aedb9c356eb32b1
Native ID: nf-22e4b536892294b57aedb9c356eb32b1-88bab

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0545e4973de823934 ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:14 PM
Completed: Mar 02, 2026 3:02:30 PM
Total Duration: 15s

Phases

Queue: 6s
Execution: 9s
Stage/Unstage: 0s