Error executing process > 'NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (NA12878_c_0002_gDNA_0001_B23KYWJLT4_1)'

Caused by:
  Process `NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (NA12878_c_0002_gDNA_0001_B23KYWJLT4_1)` terminated with an error exit status (1)


Command executed:

  samtools \
      stats \
      --threads 6 \
      --reference Homo_sapiens_assembly38.fasta \
      NA12878_c_0002_gDNA_0001_B23KYWJLT4_1.bam \
      > NA12878_c_0002_gDNA_0001_B23KYWJLT4_1.recal.cram.stats
  
  cat <<-END_VERSIONS > versions.yml
  "NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS":
      samtools: $(echo $(samtools --version 2>&1) | sed 's/^.*samtools //; s/Using.*$//')
  END_VERSIONS

Command exit status:
  1

Command output:
  (empty)

Work dir:
  s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/5019d5273552d73eb3d631a5312265

Container:
  292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0

Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`