NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (NA12878_c_0002_gDNA_0004_B23KYWJLT4_1) - autorun-sarek-cgp_atx_experiments-chunk4 - Workflow Tracker

Runs
autorun-sare..ents-chunk4
Tasks
CONPAIR_PILEUP (NA12878_c_0002_gDNA_0004_B23KYWJLT4_1)

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Task Info

Status: aborted
Hash: dfa1fedb1e49
Process: NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP
Tag: NA12878_c_0002_gDNA_0004_B23KYWJLT4_1
Attempts: 3

Attempt 3

Execution

Status: aborted
Hash: 0d/684c47
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/684c4710c67e645d878c4a6e334938
Native ID: nf-0d684c4710c67e645d878c4a6e334938-a4e62

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 24.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Mar 02, 2026 3:04:55 PM
Completed: Mar 02, 2026 3:05:03 PM
Total Duration: -

Phases

Queue: 2404h 20m
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: failed
Hash: 28/7a0247
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/7a0247165b65d0081887c03306e76d
Native ID: nf-287a0247165b65d0081887c03306e76d-5ea86

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-038aa5d7ea1697978 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:03:55 PM
Completed: Mar 02, 2026 3:04:31 PM
Total Duration: 35s

Phases

Queue: 26s
Execution: 9s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: b0/6d215c
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/6d215c8e594903fa64f4071086b89d
Native ID: nf-b06d215c8e594903fa64f4071086b89d-f35c7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08304f3419541a136 ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:12 PM
Completed: Mar 02, 2026 3:03:01 PM
Total Duration: 48s

Phases

Queue: 40s
Execution: 8s
Stage/Unstage: 0s