NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (NA12878_c_0002_gDNA_0004_B23KYWJLT4_1) - autorun-sarek-cgp_atx_experiments-chunk4 - Workflow Tracker

Runs
autorun-sare..ents-chunk4
Tasks
SAMTOOLS_STATS (NA12878_c_0002_gDNA_0004_B23KYWJLT4_1)

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Task Info

Status: failed
Hash: f22d139b4bf0
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS
Tag: NA12878_c_0002_gDNA_0004_B23KYWJLT4_1
Attempts: 3

Attempt 3

Execution

Status: failed
Hash: 68/c36db8
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/c36db862f6f26e151556b7cc23486a
Native ID: nf-68c36db862f6f26e151556b7cc23486a-b0e29

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 24.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-038aa5d7ea1697978 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:04:01 PM
Completed: Mar 02, 2026 3:04:24 PM
Total Duration: 22s

Phases

Queue: 14s
Execution: 8s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: 69/059789
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/0597890cc3022e6e37ef9b9472afab
Native ID: nf-690597890cc3022e6e37ef9b9472afab-572bc

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ca8d072eed2b9827 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:02:59 PM
Completed: Mar 02, 2026 3:03:42 PM
Total Duration: 42s

Phases

Queue: 34s
Execution: 8s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: b6/adb8be
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/adb8bebb7d4cdf43bca0c616544002
Native ID: nf-b6adb8bebb7d4cdf43bca0c616544002-438b9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-05d017230cd8483ae ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:11 PM
Completed: Mar 02, 2026 3:02:25 PM
Total Duration: 13s

Phases

Queue: 4s
Execution: 9s
Stage/Unstage: 0s