NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (NA12878_c_0002_gDNA_0002_B23KYWJLT4_1) - autorun-sarek-cgp_atx_experiments-chunk5 - Workflow Tracker

Runs
autorun-sare..ents-chunk5
Tasks
SAMTOOLS_STATS (NA12878_c_0002_gDNA_0002_B23KYWJLT4_1)

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Task Info

Status: failed
Hash: f22d139b4bf0
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS
Tag: NA12878_c_0002_gDNA_0002_B23KYWJLT4_1
Attempts: 3

Attempt 3

Execution

Status: failed
Hash: 9c/e8e3e1
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/e8e3e13d79b84202915d7dbb9bdb6b
Native ID: nf-9ce8e3e13d79b84202915d7dbb9bdb6b-651fb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 24.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-01f52872fcb3ea76b ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:03:58 PM
Completed: Mar 02, 2026 3:04:31 PM
Total Duration: 32s

Phases

Queue: 22s
Execution: 10s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: 12/1436dc
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/1436dcd55aed73b4428c8c44c6a49d
Native ID: nf-121436dcd55aed73b4428c8c44c6a49d-5dbda

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ca8d072eed2b9827 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:02:55 PM
Completed: Mar 02, 2026 3:03:54 PM
Total Duration: 58s

Phases

Queue: 50s
Execution: 8s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: 0a/8fd00c
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/8fd00cf0d0156210f52ce376ef1201
Native ID: nf-0a8fd00cf0d0156210f52ce376ef1201-b2db0

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0e1b357cdf66a328b ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:10 PM
Completed: Mar 02, 2026 3:02:22 PM
Total Duration: 11s

Phases

Queue: 3s
Execution: 8s
Stage/Unstage: 0s