Tasks
Actions
Resume
To resume this run, resubmit with same or fixed code. You can also change other parameters but that will affect caching behavior.
-resume 9e351063-2616-461b-b66b-78d1c0299024 -name bding-cnv-pipe-2026-02-26t17-24-14z
Error Report
Error executing process > 'CNV_PIPE:CalcPanelCoverage (FC09_saliva_cnv_calc_panel_coverage_3599842386_r9)'
Caused by:
K8s Job nf-4e4a5311a2b867a618da09efe474dcd2-da58e execution failed: Job has reached the specified backoff limit
Command executed:
echo "$(pwd)"
mkdir -p 3599842386_r9/
cnv_pipe calc-panel-coverage \
3599842386_r9.bam \
Renasight_CNV.tm.bed \
$(pwd)/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz \
$(pwd)/counts.tsv \
1 \
20 \
$(pwd)/3599842386_r9/ \
Command exit status:
-
Command output:
(empty)
Work dir:
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/4a5311a2b867a618da09efe474dcd2
Container:
292967571998.dkr.ecr.us-west-2.amazonaws.com/bding/cnv_pipe:bding_1.0.1
Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh`
Workflow
- Language / Cluster
- Nextflow / pltf-dev
- Session ID
- 9e351063-2616-461b-b66b-78d1c0299024
- Source
- /code/cnv_pipe.nf
- Work Dir
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work
- Submitted By
- bding
- Resumed
- No
Cost and Runtime
- Status
- failed
- Cost
- $1.77
- Outputs
- 15 MB
- Started
- Feb 26, 2026 9:24 AM
- Completed
- Feb 26, 2026 9:37 AM
- Duration
- 13m 13s
- Post-workflow Transfer
- 3s
- Exit Status
- -
- Peak Tasks / CPU / Mem
- 292 / 292 / 5.7 TB