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AI-generated troubleshooting analysis is available in the AI Analysis tab.
Resume
To resume this run, resubmit with same or fixed code. You can also change other parameters but that will affect caching behavior.
-resume bding-cnv-pipe-2026-05-18t20-19-37z
Error Report
Error executing process > 'CNV_PIPE:CalcPanelCoverage (FC10_cnv_calc_panel_coverage_3579450943_r9)'
Caused by:
Process `CNV_PIPE:CalcPanelCoverage (FC10_cnv_calc_panel_coverage_3579450943_r9)` terminated with an error exit status (143)
Command executed:
echo "$(pwd)"
mkdir -p 3579450943_r9/
cnv_pipe calc-panel-coverage \
3579450943_r9.bam \
Renasight_CNV.tm.bed \
$(pwd)/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz \
$(pwd)/counts.tsv \
1 \
20 \
$(pwd)/3579450943_r9/ \
Command exit status:
143
Command output:
/tmp/nxf.0rbn18r3yb
Work dir:
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/7e689722634e40488baa542a572d20
Container:
292967571998.dkr.ecr.us-west-2.amazonaws.com/bding/cnv_pipe:bding_1.0.6
Tip: when you have fixed the problem you can continue the execution adding the option `-resume` to the run command line
Workflow
- Language / Cluster
- Nextflow / pltf-dev
- Session ID
- 1c032dfc-1852-4baf-8c94-ca32f7fff8a8
- Source
- /code/cnv_pipe.nf
- Work Dir
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work
- Submitted By
- bding
- Resumed
- No
Cost and Runtime
- Status
- failed
- Cost
- $19.23
- Outputs
- 8 MB
- Started
- May 18, 2026 1:20 PM
- Completed
- May 18, 2026 1:27 PM
- Duration
- 7m 12s
- Post-workflow Transfer
- 2s
- Exit Status
- 143
- Peak Tasks / CPU / Mem
- 364 / 728 / 71.1 TB