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AI-generated troubleshooting analysis is available in the AI Analysis tab.
Resume
To resume this run, resubmit with same or fixed code. You can also change other parameters but that will affect caching behavior.
-resume b8efcc6b-d33a-4044-89ef-9952c0de304b -name bding-cnv-pipe-2026-05-18t20-19-52z
Error Report
Error executing process > 'CNV_PIPE:CalcPanelCoverage (FC13_cnv_calc_panel_coverage_3700651488_r13)'
Caused by:
Process `CNV_PIPE:CalcPanelCoverage (FC13_cnv_calc_panel_coverage_3700651488_r13)` terminated with an error exit status (143)
Command executed:
echo "$(pwd)"
mkdir -p 3700651488_r13/
cnv_pipe calc-panel-coverage \
3700651488_r13.bam \
Renasight_CNV.tm.bed \
$(pwd)/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz \
$(pwd)/counts.tsv \
1 \
20 \
$(pwd)/3700651488_r13/ \
Command exit status:
143
Command output:
/tmp/nxf.ceT58LVmka
Work dir:
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/60a4175521d3174f8ec0eb110b3f73
Container:
292967571998.dkr.ecr.us-west-2.amazonaws.com/bding/cnv_pipe:bding_1.0.6
Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`
Workflow
- Language / Cluster
- Nextflow / pltf-dev
- Session ID
- b8efcc6b-d33a-4044-89ef-9952c0de304b
- Source
- /code/cnv_pipe.nf
- Work Dir
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work
- Submitted By
- bding
- Resumed
- No
Cost and Runtime
- Status
- failed
- Cost
- $18.47
- Outputs
- 8 MB
- Started
- May 18, 2026 1:20 PM
- Completed
- May 18, 2026 1:27 PM
- Duration
- 6m 46s
- Post-workflow Transfer
- 2s
- Exit Status
- 143
- Peak Tasks / CPU / Mem
- 371 / 742 / 72.5 TB