File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/521a71c127fb13052698dedd048b79/.command.err
Size
1.5 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wxsufb6x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 23:14:34,251 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 23:14:35,028 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 23:14:35,049 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_4.parquet
2026-06-08 23:14:35,908 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-08 23:14:35,909 - cnv_pipe.batch.run_model - INFO - Loading per-probe beta priors from beta_constrain.tsv
2026-06-08 23:14:35,919 - cnv_pipe.batch.run_model - INFO - Matched beta priors for 50 / 22880 probes from beta_constrain.tsv
2026-06-08 23:14:36,301 - cnv_pipe.batch.run_model.cluster59 - INFO - Child process started for cluster 59 with 161 probes
2026-06-08 23:17:15,265 - cnv_pipe.batch.run_model.cluster59 - INFO - Child process finished cluster 59. Wrote clusters_4/cluster_59_samples.csv and clusters_4/cluster_59_params.csv
2026-06-08 23:17:15,267 - cnv_pipe.batch.run_model - INFO - Cluster 59 processed successfully with status SUCCESS
2026-06-08 23:17:15,267 - cnv_pipe.batch.run_model - INFO - All done. Processed the cluster 59 in 159.33 seconds