File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/b8ffd7bee8b05b935e3a0d18b8bd44/.command.err
Size
1.5 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0uc2zc_l because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 23:14:08,237 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 23:14:09,008 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 23:14:09,030 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_4.parquet
2026-06-08 23:14:09,909 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-08 23:14:09,909 - cnv_pipe.batch.run_model - INFO - Loading per-probe beta priors from beta_constrain.tsv
2026-06-08 23:14:09,919 - cnv_pipe.batch.run_model - INFO - Matched beta priors for 50 / 22880 probes from beta_constrain.tsv
2026-06-08 23:14:10,297 - cnv_pipe.batch.run_model.cluster63 - INFO - Child process started for cluster 63 with 182 probes
2026-06-08 23:17:04,867 - cnv_pipe.batch.run_model.cluster63 - INFO - Child process finished cluster 63. Wrote clusters_4/cluster_63_samples.csv and clusters_4/cluster_63_params.csv
2026-06-08 23:17:04,869 - cnv_pipe.batch.run_model - INFO - Cluster 63 processed successfully with status SUCCESS
2026-06-08 23:17:04,869 - cnv_pipe.batch.run_model - INFO - All done. Processed the cluster 63 in 174.94 seconds