File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/cccd071e80fd02f87843dd952180be/.command.err
Size
1.5 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d9vjt32l because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 23:14:19,295 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 23:14:20,121 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 23:14:20,143 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_4.parquet
2026-06-08 23:14:21,092 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-08 23:14:21,093 - cnv_pipe.batch.run_model - INFO - Loading per-probe beta priors from beta_constrain.tsv
2026-06-08 23:14:21,104 - cnv_pipe.batch.run_model - INFO - Matched beta priors for 50 / 22880 probes from beta_constrain.tsv
2026-06-08 23:14:21,488 - cnv_pipe.batch.run_model.cluster50 - INFO - Child process started for cluster 50 with 186 probes
2026-06-08 23:17:41,688 - cnv_pipe.batch.run_model.cluster50 - INFO - Child process finished cluster 50. Wrote clusters_4/cluster_50_samples.csv and clusters_4/cluster_50_params.csv
2026-06-08 23:17:41,689 - cnv_pipe.batch.run_model - INFO - Cluster 50 processed successfully with status SUCCESS
2026-06-08 23:17:41,690 - cnv_pipe.batch.run_model - INFO - All done. Processed the cluster 50 in 200.57 seconds