File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/eefc34ea2d532f0c48756fdbfd5f35/.command.err
Size
1.5 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rrjkixqt because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 23:14:28,006 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 23:14:28,773 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 23:14:28,795 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 23:14:29,745 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-08 23:14:29,745 - cnv_pipe.batch.run_model - INFO - Loading per-probe beta priors from beta_constrain.tsv
2026-06-08 23:14:29,755 - cnv_pipe.batch.run_model - INFO - Matched beta priors for 50 / 22880 probes from beta_constrain.tsv
2026-06-08 23:14:30,132 - cnv_pipe.batch.run_model.cluster143 - INFO - Child process started for cluster 143 with 100 probes
2026-06-08 23:16:23,742 - cnv_pipe.batch.run_model.cluster143 - INFO - Child process finished cluster 143. Wrote clusters_1/cluster_143_samples.csv and clusters_1/cluster_143_params.csv
2026-06-08 23:16:23,743 - cnv_pipe.batch.run_model - INFO - Cluster 143 processed successfully with status SUCCESS
2026-06-08 23:16:23,743 - cnv_pipe.batch.run_model - INFO - All done. Processed the cluster 143 in 113.97 seconds