File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/dceaa4452763285cb19f66a65f7db1/.command.err
Size
1.5 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_9oht1oq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 23:14:26,952 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 23:14:27,728 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 23:14:27,750 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 23:14:28,636 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-08 23:14:28,637 - cnv_pipe.batch.run_model - INFO - Loading per-probe beta priors from beta_constrain.tsv
2026-06-08 23:14:28,646 - cnv_pipe.batch.run_model - INFO - Matched beta priors for 50 / 22880 probes from beta_constrain.tsv
2026-06-08 23:14:29,028 - cnv_pipe.batch.run_model.cluster114 - INFO - Child process started for cluster 114 with 104 probes
2026-06-08 23:16:21,012 - cnv_pipe.batch.run_model.cluster114 - INFO - Child process finished cluster 114. Wrote clusters_1/cluster_114_samples.csv and clusters_1/cluster_114_params.csv
2026-06-08 23:16:21,013 - cnv_pipe.batch.run_model - INFO - Cluster 114 processed successfully with status SUCCESS
2026-06-08 23:16:21,013 - cnv_pipe.batch.run_model - INFO - All done. Processed the cluster 114 in 112.35 seconds