.command.sh - Workdir - CNV_PIPE:CombineSummaries (FC13_cnv_mosaic_combine_summaries)

File Info

Filename: .command.sh
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/367264360b6efcb97ea003ab8e2851/.command.sh
Size: 31.3 KB
Task: CNV_PIPE:CombineSummaries (FC13_cnv_mosaic_combine_summaries)
Attempt
Content

#!/bin/bash -Ceuo pipefail
call_files=(call_summaries/cnv_call_3700663597_r13.tsv call_summaries/cnv_call_471142234_r13.tsv call_summaries/cnv_call_3619659344_r13.tsv call_summaries/cnv_call_3601213444_r13.tsv call_summaries/cnv_call_3700651448_r13.tsv call_summaries/cnv_call_471140793_r13.tsv call_summaries/cnv_call_3700651519_r13.tsv call_summaries/cnv_call_471203161_r13.tsv call_summaries/cnv_call_3700663361_r13.tsv call_summaries/cnv_call_3700663345_r13.tsv call_summaries/cnv_call_471141760_r13.tsv call_summaries/cnv_call_471141739_r13.tsv call_summaries/cnv_call_3700650045_r13.tsv call_summaries/cnv_call_3700650268_r13.tsv call_summaries/cnv_call_3700650997_r13.tsv call_summaries/cnv_call_3700648978_r13.tsv call_summaries/cnv_call_3700663405_r13.tsv call_summaries/cnv_call_3700651378_r13.tsv call_summaries/cnv_call_3700648921_r13.tsv call_summaries/cnv_call_3574258956_r13.tsv call_summaries/cnv_call_3700663618_r13.tsv call_summaries/cnv_call_3700650069_r13.tsv call_summaries/cnv_call_471142233_r13.tsv call_summaries/cnv_call_471140779_r13.tsv call_summaries/cnv_call_3700663537_r13.tsv call_summaries/cnv_call_3700651332_r13.tsv call_summaries/cnv_call_3700663584_r13.tsv call_summaries/cnv_call_3700652036_r13.tsv call_summaries/cnv_call_471140794_r13.tsv call_summaries/cnv_call_3700650043_r13.tsv call_summaries/cnv_call_3700651376_r13.tsv call_summaries/cnv_call_3700663169_r13.tsv call_summaries/cnv_call_3700651382_r13.tsv call_summaries/cnv_call_3700652110_r13.tsv call_summaries/cnv_call_3700652041_r13.tsv call_summaries/cnv_call_3700651459_r13.tsv call_summaries/cnv_call_3700663565_r13.tsv call_summaries/cnv_call_3700648976_r13.tsv call_summaries/cnv_call_3700651477_r13.tsv call_summaries/cnv_call_3700663373_r13.tsv call_summaries/cnv_call_3700652192_r13.tsv call_summaries/cnv_call_3700652046_r13.tsv call_summaries/cnv_call_3700663213_r13.tsv call_summaries/cnv_call_3700663234_r13.tsv call_summaries/cnv_call_3700652025_r13.tsv call_summaries/cnv_call_3619658687_r13.tsv call_summaries/cnv_call_3700651498_r13.tsv call_summaries/cnv_call_3700663200_r13.tsv call_summaries/cnv_call_3700652096_r13.tsv call_summaries/cnv_call_3601213916_r13.tsv call_summaries/cnv_call_3700663392_r13.tsv call_summaries/cnv_call_3700663553_r13.tsv call_summaries/cnv_call_3700651032_r13.tsv call_summaries/cnv_call_3700651326_r13.tsv call_summaries/cnv_call_471201172_r13.tsv call_summaries/cnv_call_3700650968_r13.tsv call_summaries/cnv_call_471142219_r13.tsv call_summaries/cnv_call_3700652132_r13.tsv call_summaries/cnv_call_3700663181_r13.tsv call_summaries/cnv_call_3700648973_r13.tsv call_summaries/cnv_call_3700663203_r13.tsv call_summaries/cnv_call_471141411_r13.tsv call_summaries/cnv_call_3700651456_r13.tsv call_summaries/cnv_call_471142240_r13.tsv call_summaries/cnv_call_3619658671_r13.tsv call_summaries/cnv_call_3700651373_r13.tsv call_summaries/cnv_call_3700663426_r13.tsv call_summaries/cnv_call_3700652157_r13.tsv call_summaries/cnv_call_3700651474_r13.tsv call_summaries/cnv_call_3700651334_r13.tsv call_summaries/cnv_call_3700663153_r13.tsv call_summaries/cnv_call_3700651434_r13.tsv call_summaries/cnv_call_471141754_r13.tsv call_summaries/cnv_call_3700652042_r13.tsv call_summaries/cnv_call_3574103429_r13.tsv call_summaries/cnv_call_3574258833_r13.tsv call_summaries/cnv_call_471141753_r13.tsv call_summaries/cnv_call_3700650976_r13.tsv call_summaries/cnv_call_3700651018_r13.tsv call_summaries/cnv_call_471140800_r13.tsv call_summaries/cnv_call_3700650257_r13.tsv call_summaries/cnv_call_3700652082_r13.tsv call_summaries/cnv_call_3700650994_r13.tsv call_summaries/cnv_call_3619659359_r13.tsv call_summaries/cnv_call_3700663395_r13.tsv call_summaries/cnv_call_471141426_r13.tsv call_summaries/cnv_call_3700652014_r13.tsv call_summaries/cnv_call_471203993_r13.tsv call_summaries/cnv_call_3700651328_r13.tsv call_summaries/cnv_call_3700651040_r13.tsv call_summaries/cnv_call_3700648982_r13.tsv call_summaries/cnv_call_471203350_r13.tsv call_summaries/cnv_call_3700663587_r13.tsv call_summaries/cnv_call_3700652027_r13.tsv call_summaries/cnv_call_471141431_r13.tsv call_summaries/cnv_call_3700652107_r13.tsv call_summaries/cnv_call_3700650260_r13.tsv call_summaries/cnv_call_3700651495_r13.tsv call_summaries/cnv_call_3700651446_r13.tsv call_summaries/cnv_call_3700651504_r13.tsv call_summaries/cnv_call_3700651015_r13.tsv call_summaries/cnv_call_3700652008_r13.tsv call_summaries/cnv_call_3619659364_r13.tsv call_summaries/cnv_call_3700652079_r13.tsv call_summaries/cnv_call_3601213394_r13.tsv call_summaries/cnv_call_3700651433_r13.tsv call_summaries/cnv_call_3700651490_r13.tsv call_summaries/cnv_call_3700663337_r13.tsv call_summaries/cnv_call_3700650967_r13.tsv call_summaries/cnv_call_3700663232_r13.tsv call_summaries/cnv_call_3574260751_r13.tsv call_summaries/cnv_call_3700663424_r13.tsv call_summaries/cnv_call_3619658692_r13.tsv call_summaries/cnv_call_3700652089_r13.tsv call_summaries/cnv_call_3700652059_r13.tsv call_summaries/cnv_call_3700652174_r13.tsv call_summaries/cnv_call_3700652078_r13.tsv call_summaries/cnv_call_3700648849_r13.tsv call_summaries/cnv_call_3700663365_r13.tsv call_summaries/cnv_call_3700652054_r13.tsv call_summaries/cnv_call_3619659356_r13.tsv call_summaries/cnv_call_3579469123_r13.tsv call_summaries/cnv_call_3599847854_r13.tsv call_summaries/cnv_call_3599856669_r13.tsv call_summaries/cnv_call_3619658684_r13.tsv call_summaries/cnv_call_3601213337_r13.tsv call_summaries/cnv_call_3700652070_r13.tsv call_summaries/cnv_call_3700652155_r13.tsv call_summaries/cnv_call_471141741_r13.tsv call_summaries/cnv_call_3700663157_r13.tsv call_summaries/cnv_call_3700663616_r13.tsv call_summaries/cnv_call_3700651439_r13.tsv call_summaries/cnv_call_3574146293_r13.tsv call_summaries/cnv_call_3700651013_r13.tsv call_summaries/cnv_call_3700652065_r13.tsv call_summaries/cnv_call_3700663211_r13.tsv call_summaries/cnv_call_3700651473_r13.tsv call_summaries/cnv_call_3700663150_r13.tsv call_summaries/cnv_call_3700663529_r13.tsv call_summaries/cnv_call_3700663557_r13.tsv call_summaries/cnv_call_471201190_2_r13.tsv call_summaries/cnv_call_3700663534_r13.tsv call_summaries/cnv_call_3700651447_r13.tsv call_summaries/cnv_call_3700663342_r13.tsv call_summaries/cnv_call_3619658675_r13.tsv call_summaries/cnv_call_3619659347_r13.tsv call_summaries/cnv_call_3700663416_r13.tsv call_summaries/cnv_call_3700663344_r13.tsv call_summaries/cnv_call_3700663145_r13.tsv call_summaries/cnv_call_3574260342_r13.tsv call_summaries/cnv_call_3700663403_r13.tsv call_summaries/cnv_call_471141423_r13.tsv call_summaries/cnv_call_471142221_r13.tsv call_summaries/cnv_call_3700663173_r13.tsv call_summaries/cnv_call_3700663224_r13.tsv call_summaries/cnv_call_3700650966_r13.tsv call_summaries/cnv_call_3700650208_r13.tsv call_summaries/cnv_call_3601213442_r13.tsv call_summaries/cnv_call_471140781_r13.tsv call_summaries/cnv_call_3700651472_r13.tsv call_summaries/cnv_call_3700651435_r13.tsv call_summaries/cnv_call_3700650992_r13.tsv call_summaries/cnv_call_3700663590_r13.tsv call_summaries/cnv_call_3700652161_r13.tsv call_summaries/cnv_call_3700663349_r13.tsv call_summaries/cnv_call_3700663398_r13.tsv call_summaries/cnv_call_3700652104_r13.tsv call_summaries/cnv_call_3700650986_r13.tsv call_summaries/cnv_call_3700648862_r13.tsv call_summaries/cnv_call_471141414_r13.tsv call_summaries/cnv_call_3700663595_r13.tsv call_summaries/cnv_call_3700663541_r13.tsv call_summaries/cnv_call_3700651369_r13.tsv call_summaries/cnv_call_3579468881_r13.tsv call_summaries/cnv_call_3700651312_r13.tsv call_summaries/cnv_call_3700652011_r13.tsv call_summaries/cnv_call_3700652019_r13.tsv call_summaries/cnv_call_3700651493_r13.tsv call_summaries/cnv_call_3700663536_r13.tsv call_summaries/cnv_call_3700663206_r13.tsv call_summaries/cnv_call_3700652073_r13.tsv call_summaries/cnv_call_3700663608_r13.tsv call_summaries/cnv_call_3700648969_r13.tsv call_summaries/cnv_call_3700650955_r13.tsv call_summaries/cnv_call_3700652169_r13.tsv call_summaries/cnv_call_471142228_r13.tsv call_summaries/cnv_call_3700651506_r13.tsv call_summaries/cnv_call_3700648988_r13.tsv call_summaries/cnv_call_3700663239_r13.tsv call_summaries/cnv_call_3700651505_r13.tsv call_summaries/cnv_call_3619659357_r13.tsv call_summaries/cnv_call_3700651001_r13.tsv call_summaries/cnv_call_3700651315_r13.tsv call_summaries/cnv_call_3700663623_r13.tsv call_summaries/cnv_call_3700663391_r13.tsv call_summaries/cnv_call_3700652048_r13.tsv call_summaries/cnv_call_471141764_r13.tsv call_summaries/cnv_call_3619659355_r13.tsv call_summaries/cnv_call_471141763_r13.tsv call_summaries/cnv_call_3700663368_r13.tsv call_summaries/cnv_call_3700663560_r13.tsv call_summaries/cnv_call_471141748_r13.tsv call_summaries/cnv_call_471141424_r13.tsv call_summaries/cnv_call_471142222_r13.tsv call_summaries/cnv_call_3700663583_r13.tsv call_summaries/cnv_call_3700652087_r13.tsv call_summaries/cnv_call_3700663539_r13.tsv call_summaries/cnv_call_3579468541_r13.tsv call_summaries/cnv_call_3700651020_r13.tsv call_summaries/cnv_call_3700651331_r13.tsv call_summaries/cnv_call_471140804_r13.tsv call_summaries/cnv_call_3700651365_r13.tsv call_summaries/cnv_call_3700663347_r13.tsv call_summaries/cnv_call_3700651026_r13.tsv call_summaries/cnv_call_3700652072_r13.tsv call_summaries/cnv_call_3700651313_r13.tsv call_summaries/cnv_call_3700650033_r13.tsv call_summaries/cnv_call_471140788_r13.tsv call_summaries/cnv_call_3700663559_r13.tsv call_summaries/cnv_call_471203138_r13.tsv call_summaries/cnv_call_3700663176_r13.tsv call_summaries/cnv_call_3700663431_r13.tsv call_summaries/cnv_call_3700663155_r13.tsv call_summaries/cnv_call_471200525_r13.tsv call_summaries/cnv_call_3700663593_r13.tsv call_summaries/cnv_call_3700663236_r13.tsv call_summaries/cnv_call_3700650952_r13.tsv call_summaries/cnv_call_471140782_r13.tsv call_summaries/cnv_call_3700651432_r13.tsv call_summaries/cnv_call_3700663620_r13.tsv call_summaries/cnv_call_3700651025_r13.tsv call_summaries/cnv_call_3700663367_r13.tsv call_summaries/cnv_call_3700652113_r13.tsv call_summaries/cnv_call_3700663199_r13.tsv call_summaries/cnv_call_3700651394_r13.tsv call_summaries/cnv_call_3700652062_r13.tsv call_summaries/cnv_call_3700651481_r13.tsv call_summaries/cnv_call_3700651484_r13.tsv call_summaries/cnv_call_3700650984_r13.tsv call_summaries/cnv_call_3700652168_r13.tsv call_summaries/cnv_call_3700648890_r13.tsv call_summaries/cnv_call_3700651509_r13.tsv call_summaries/cnv_call_3700650199_r13.tsv call_summaries/cnv_call_3700652017_r13.tsv call_summaries/cnv_call_3700652153_r13.tsv call_summaries/cnv_call_3700651395_r13.tsv call_summaries/cnv_call_3700652031_r13.tsv call_summaries/cnv_call_3700648994_r13.tsv call_summaries/cnv_call_3700648965_r13.tsv call_summaries/cnv_call_3599846892_r13.tsv call_summaries/cnv_call_3700651325_r13.tsv call_summaries/cnv_call_3700651500_r13.tsv call_summaries/cnv_call_3601213931_r13.tsv call_summaries/cnv_call_3574259226_r13.tsv call_summaries/cnv_call_471200531_r13.tsv call_summaries/cnv_call_471142243_r13.tsv call_summaries/cnv_call_471142244_r13.tsv call_summaries/cnv_call_3700651454_r13.tsv call_summaries/cnv_call_3619658683_r13.tsv call_summaries/cnv_call_471141422_r13.tsv call_summaries/cnv_call_3700652037_r13.tsv call_summaries/cnv_call_471140803_r13.tsv call_summaries/cnv_call_3700663152_r13.tsv call_summaries/cnv_call_471204507_r13.tsv call_summaries/cnv_call_3700650063_r13.tsv call_summaries/cnv_call_3700663401_r13.tsv call_summaries/cnv_call_3700651388_r13.tsv call_summaries/cnv_call_3700663209_r13.tsv call_summaries/cnv_call_471204218_r13.tsv call_summaries/cnv_call_3700663428_r13.tsv call_summaries/cnv_call_3700650974_r13.tsv call_summaries/cnv_call_471203202_r13.tsv call_summaries/cnv_call_471141742_r13.tsv call_summaries/cnv_call_3700663175_r13.tsv call_summaries/cnv_call_3700648923_r13.tsv call_summaries/cnv_call_3619658685_r13.tsv call_summaries/cnv_call_3700648995_r13.tsv call_summaries/cnv_call_3700652106_r13.tsv call_summaries/cnv_call_3700651029_r13.tsv call_summaries/cnv_call_3700652040_r13.tsv call_summaries/cnv_call_3700651008_r13.tsv call_summaries/cnv_call_3574258969_r13.tsv call_summaries/cnv_call_3700650990_r13.tsv call_summaries/cnv_call_3700651314_r13.tsv call_summaries/cnv_call_3700652187_r13.tsv call_summaries/cnv_call_3700663542_r13.tsv call_summaries/cnv_call_3700650216_r13.tsv call_summaries/cnv_call_3700663158_r13.tsv call_summaries/cnv_call_3700652119_r13.tsv call_summaries/cnv_call_3700651030_r13.tsv call_summaries/cnv_call_3700651000_r13.tsv call_summaries/cnv_call_3574103386_r13.tsv call_summaries/cnv_call_3700651324_r13.tsv call_summaries/cnv_call_3700652145_r13.tsv call_summaries/cnv_call_3700651492_r13.tsv call_summaries/cnv_call_3700663606_r13.tsv call_summaries/cnv_call_471142226_r13.tsv call_summaries/cnv_call_471201190_r13.tsv call_summaries/cnv_call_471142232_r13.tsv call_summaries/cnv_call_3700651370_r13.tsv call_summaries/cnv_call_3619659360_r13.tsv call_summaries/cnv_call_3700652141_r13.tsv call_summaries/cnv_call_3700663412_r13.tsv call_summaries/cnv_call_3700651480_r13.tsv call_summaries/cnv_call_471142231_r13.tsv call_summaries/cnv_call_3700650474_r13.tsv call_summaries/cnv_call_3700663400_r13.tsv call_summaries/cnv_call_3574259133_r13.tsv call_summaries/cnv_call_3700663350_r13.tsv call_summaries/cnv_call_3619658691_r13.tsv call_summaries/cnv_call_3619658679_r13.tsv call_summaries/cnv_call_471203204_r13.tsv call_summaries/cnv_call_3700648980_r13.tsv call_summaries/cnv_call_471141751_r13.tsv call_summaries/cnv_call_3700652105_r13.tsv call_summaries/cnv_call_3700652045_r13.tsv call_summaries/cnv_call_471141418_r13.tsv call_summaries/cnv_call_3700663414_r13.tsv call_summaries/cnv_call_3700663611_r13.tsv call_summaries/cnv_call_3700663227_r13.tsv call_summaries/cnv_call_3700652066_r13.tsv call_summaries/cnv_call_471141427_r13.tsv call_summaries/cnv_call_3619658688_r13.tsv call_summaries/cnv_call_3700663592_r13.tsv call_summaries/cnv_call_471141746_r13.tsv call_summaries/cnv_call_3700652186_r13.tsv call_summaries/cnv_call_3579469046_r13.tsv call_summaries/cnv_call_3700652094_r13.tsv call_summaries/cnv_call_3700651503_r13.tsv call_summaries/cnv_call_3579468869_r13.tsv call_summaries/cnv_call_3700650972_r13.tsv call_summaries/cnv_call_3619658690_r13.tsv call_summaries/cnv_call_3619659351_r13.tsv call_summaries/cnv_call_3700663208_r13.tsv call_summaries/cnv_call_3700651034_r13.tsv call_summaries/cnv_call_471140786_r13.tsv call_summaries/cnv_call_3700651470_r13.tsv call_summaries/cnv_call_3700651380_r13.tsv call_summaries/cnv_call_3619659362_r13.tsv call_summaries/cnv_call_3700652023_r13.tsv call_summaries/cnv_call_471141429_r13.tsv call_summaries/cnv_call_3700663222_r13.tsv call_summaries/cnv_call_3700663220_r13.tsv call_summaries/cnv_call_3619659363_r13.tsv call_summaries/cnv_call_3700648970_r13.tsv call_summaries/cnv_call_471203140_r13.tsv call_summaries/cnv_call_3601213777_r13.tsv call_summaries/cnv_call_471140791_r13.tsv call_summaries/cnv_call_471141752_r13.tsv call_summaries/cnv_call_3700663604_r13.tsv call_summaries/cnv_call_3700650962_r13.tsv call_summaries/cnv_call_471203700_r13.tsv call_summaries/cnv_call_3700663566_r13.tsv call_summaries/cnv_call_3579447764_r13.tsv call_summaries/cnv_call_3700663419_r13.tsv call_summaries/cnv_call_471203424_r13.tsv call_summaries/cnv_call_471140792_r13.tsv call_summaries/cnv_call_3700652049_r13.tsv call_summaries/cnv_call_3700651329_r13.tsv call_summaries/cnv_call_471141430_r13.tsv call_summaries/cnv_call_3700651488_r13.tsv call_summaries/cnv_call_3700651510_r13.tsv call_summaries/cnv_call_3700663374_r13.tsv call_summaries/cnv_call_3700648967_r13.tsv call_summaries/cnv_call_3700652032_r13.tsv call_summaries/cnv_call_3700651367_r13.tsv call_summaries/cnv_call_3574101803_r13.tsv call_summaries/cnv_call_3700651452_r13.tsv call_summaries/cnv_call_3700651012_r13.tsv call_summaries/cnv_call_3700663182_r13.tsv call_summaries/cnv_call_3601213315_r13.tsv)
head -1 "${call_files[0]}" > cnv_call_summary.tsv
for f in "${call_files[@]}"; do
    tail -n +2 "$f" >> cnv_call_summary.tsv
done

gene_files=(gene_summaries/cnv_gene_3700663597_r13.tsv gene_summaries/cnv_gene_471142234_r13.tsv gene_summaries/cnv_gene_3619659344_r13.tsv gene_summaries/cnv_gene_3601213444_r13.tsv gene_summaries/cnv_gene_3700651448_r13.tsv gene_summaries/cnv_gene_471140793_r13.tsv gene_summaries/cnv_gene_3700651519_r13.tsv gene_summaries/cnv_gene_471203161_r13.tsv gene_summaries/cnv_gene_3700663361_r13.tsv gene_summaries/cnv_gene_3700663345_r13.tsv gene_summaries/cnv_gene_471141760_r13.tsv gene_summaries/cnv_gene_471141739_r13.tsv gene_summaries/cnv_gene_3700650045_r13.tsv gene_summaries/cnv_gene_3700650268_r13.tsv gene_summaries/cnv_gene_3700650997_r13.tsv gene_summaries/cnv_gene_3700648978_r13.tsv gene_summaries/cnv_gene_3700663405_r13.tsv gene_summaries/cnv_gene_3700651378_r13.tsv gene_summaries/cnv_gene_3700648921_r13.tsv gene_summaries/cnv_gene_3574258956_r13.tsv gene_summaries/cnv_gene_3700663618_r13.tsv gene_summaries/cnv_gene_3700650069_r13.tsv gene_summaries/cnv_gene_471142233_r13.tsv gene_summaries/cnv_gene_471140779_r13.tsv gene_summaries/cnv_gene_3700663537_r13.tsv gene_summaries/cnv_gene_3700651332_r13.tsv gene_summaries/cnv_gene_3700663584_r13.tsv gene_summaries/cnv_gene_3700652036_r13.tsv gene_summaries/cnv_gene_471140794_r13.tsv gene_summaries/cnv_gene_3700650043_r13.tsv gene_summaries/cnv_gene_3700651376_r13.tsv gene_summaries/cnv_gene_3700663169_r13.tsv gene_summaries/cnv_gene_3700651382_r13.tsv gene_summaries/cnv_gene_3700652110_r13.tsv gene_summaries/cnv_gene_3700652041_r13.tsv gene_summaries/cnv_gene_3700651459_r13.tsv gene_summaries/cnv_gene_3700663565_r13.tsv gene_summaries/cnv_gene_3700648976_r13.tsv gene_summaries/cnv_gene_3700651477_r13.tsv gene_summaries/cnv_gene_3700663373_r13.tsv gene_summaries/cnv_gene_3700652192_r13.tsv gene_summaries/cnv_gene_3700652046_r13.tsv gene_summaries/cnv_gene_3700663213_r13.tsv gene_summaries/cnv_gene_3700663234_r13.tsv gene_summaries/cnv_gene_3700652025_r13.tsv gene_summaries/cnv_gene_3619658687_r13.tsv gene_summaries/cnv_gene_3700651498_r13.tsv gene_summaries/cnv_gene_3700663200_r13.tsv gene_summaries/cnv_gene_3700652096_r13.tsv gene_summaries/cnv_gene_3601213916_r13.tsv gene_summaries/cnv_gene_3700663392_r13.tsv gene_summaries/cnv_gene_3700663553_r13.tsv gene_summaries/cnv_gene_3700651032_r13.tsv gene_summaries/cnv_gene_3700651326_r13.tsv gene_summaries/cnv_gene_471201172_r13.tsv gene_summaries/cnv_gene_3700650968_r13.tsv gene_summaries/cnv_gene_471142219_r13.tsv gene_summaries/cnv_gene_3700652132_r13.tsv gene_summaries/cnv_gene_3700663181_r13.tsv gene_summaries/cnv_gene_3700648973_r13.tsv gene_summaries/cnv_gene_3700663203_r13.tsv gene_summaries/cnv_gene_471141411_r13.tsv gene_summaries/cnv_gene_3700651456_r13.tsv gene_summaries/cnv_gene_471142240_r13.tsv gene_summaries/cnv_gene_3619658671_r13.tsv gene_summaries/cnv_gene_3700651373_r13.tsv gene_summaries/cnv_gene_3700663426_r13.tsv gene_summaries/cnv_gene_3700652157_r13.tsv gene_summaries/cnv_gene_3700651474_r13.tsv gene_summaries/cnv_gene_3700651334_r13.tsv gene_summaries/cnv_gene_3700663153_r13.tsv gene_summaries/cnv_gene_3700651434_r13.tsv gene_summaries/cnv_gene_471141754_r13.tsv gene_summaries/cnv_gene_3700652042_r13.tsv gene_summaries/cnv_gene_3574103429_r13.tsv gene_summaries/cnv_gene_3574258833_r13.tsv gene_summaries/cnv_gene_471141753_r13.tsv gene_summaries/cnv_gene_3700650976_r13.tsv gene_summaries/cnv_gene_3700651018_r13.tsv gene_summaries/cnv_gene_471140800_r13.tsv gene_summaries/cnv_gene_3700650257_r13.tsv gene_summaries/cnv_gene_3700652082_r13.tsv gene_summaries/cnv_gene_3700650994_r13.tsv gene_summaries/cnv_gene_3619659359_r13.tsv gene_summaries/cnv_gene_3700663395_r13.tsv gene_summaries/cnv_gene_471141426_r13.tsv gene_summaries/cnv_gene_3700652014_r13.tsv gene_summaries/cnv_gene_471203993_r13.tsv gene_summaries/cnv_gene_3700651328_r13.tsv gene_summaries/cnv_gene_3700651040_r13.tsv gene_summaries/cnv_gene_3700648982_r13.tsv gene_summaries/cnv_gene_471203350_r13.tsv gene_summaries/cnv_gene_3700663587_r13.tsv gene_summaries/cnv_gene_3700652027_r13.tsv gene_summaries/cnv_gene_471141431_r13.tsv gene_summaries/cnv_gene_3700652107_r13.tsv gene_summaries/cnv_gene_3700650260_r13.tsv gene_summaries/cnv_gene_3700651495_r13.tsv gene_summaries/cnv_gene_3700651446_r13.tsv gene_summaries/cnv_gene_3700651504_r13.tsv gene_summaries/cnv_gene_3700651015_r13.tsv gene_summaries/cnv_gene_3700652008_r13.tsv gene_summaries/cnv_gene_3619659364_r13.tsv gene_summaries/cnv_gene_3700652079_r13.tsv gene_summaries/cnv_gene_3601213394_r13.tsv gene_summaries/cnv_gene_3700651433_r13.tsv gene_summaries/cnv_gene_3700651490_r13.tsv gene_summaries/cnv_gene_3700663337_r13.tsv gene_summaries/cnv_gene_3700650967_r13.tsv gene_summaries/cnv_gene_3700663232_r13.tsv gene_summaries/cnv_gene_3574260751_r13.tsv gene_summaries/cnv_gene_3700663424_r13.tsv gene_summaries/cnv_gene_3619658692_r13.tsv gene_summaries/cnv_gene_3700652089_r13.tsv gene_summaries/cnv_gene_3700652059_r13.tsv gene_summaries/cnv_gene_3700652174_r13.tsv gene_summaries/cnv_gene_3700652078_r13.tsv gene_summaries/cnv_gene_3700648849_r13.tsv gene_summaries/cnv_gene_3700663365_r13.tsv gene_summaries/cnv_gene_3700652054_r13.tsv gene_summaries/cnv_gene_3619659356_r13.tsv gene_summaries/cnv_gene_3579469123_r13.tsv gene_summaries/cnv_gene_3599847854_r13.tsv gene_summaries/cnv_gene_3599856669_r13.tsv gene_summaries/cnv_gene_3619658684_r13.tsv gene_summaries/cnv_gene_3601213337_r13.tsv gene_summaries/cnv_gene_3700652070_r13.tsv gene_summaries/cnv_gene_3700652155_r13.tsv gene_summaries/cnv_gene_471141741_r13.tsv gene_summaries/cnv_gene_3700663157_r13.tsv gene_summaries/cnv_gene_3700663616_r13.tsv gene_summaries/cnv_gene_3700651439_r13.tsv gene_summaries/cnv_gene_3574146293_r13.tsv gene_summaries/cnv_gene_3700651013_r13.tsv gene_summaries/cnv_gene_3700652065_r13.tsv gene_summaries/cnv_gene_3700663211_r13.tsv gene_summaries/cnv_gene_3700651473_r13.tsv gene_summaries/cnv_gene_3700663150_r13.tsv gene_summaries/cnv_gene_3700663529_r13.tsv gene_summaries/cnv_gene_3700663557_r13.tsv gene_summaries/cnv_gene_471201190_2_r13.tsv gene_summaries/cnv_gene_3700663534_r13.tsv gene_summaries/cnv_gene_3700651447_r13.tsv gene_summaries/cnv_gene_3700663342_r13.tsv gene_summaries/cnv_gene_3619658675_r13.tsv gene_summaries/cnv_gene_3619659347_r13.tsv gene_summaries/cnv_gene_3700663416_r13.tsv gene_summaries/cnv_gene_3700663344_r13.tsv gene_summaries/cnv_gene_3700663145_r13.tsv gene_summaries/cnv_gene_3574260342_r13.tsv gene_summaries/cnv_gene_3700663403_r13.tsv gene_summaries/cnv_gene_471141423_r13.tsv gene_summaries/cnv_gene_471142221_r13.tsv gene_summaries/cnv_gene_3700663173_r13.tsv gene_summaries/cnv_gene_3700663224_r13.tsv gene_summaries/cnv_gene_3700650966_r13.tsv gene_summaries/cnv_gene_3700650208_r13.tsv gene_summaries/cnv_gene_3601213442_r13.tsv gene_summaries/cnv_gene_471140781_r13.tsv gene_summaries/cnv_gene_3700651472_r13.tsv gene_summaries/cnv_gene_3700651435_r13.tsv gene_summaries/cnv_gene_3700650992_r13.tsv gene_summaries/cnv_gene_3700663590_r13.tsv gene_summaries/cnv_gene_3700652161_r13.tsv gene_summaries/cnv_gene_3700663349_r13.tsv gene_summaries/cnv_gene_3700663398_r13.tsv gene_summaries/cnv_gene_3700652104_r13.tsv gene_summaries/cnv_gene_3700650986_r13.tsv gene_summaries/cnv_gene_3700648862_r13.tsv gene_summaries/cnv_gene_471141414_r13.tsv gene_summaries/cnv_gene_3700663595_r13.tsv gene_summaries/cnv_gene_3700663541_r13.tsv gene_summaries/cnv_gene_3700651369_r13.tsv gene_summaries/cnv_gene_3579468881_r13.tsv gene_summaries/cnv_gene_3700651312_r13.tsv gene_summaries/cnv_gene_3700652011_r13.tsv gene_summaries/cnv_gene_3700652019_r13.tsv gene_summaries/cnv_gene_3700651493_r13.tsv gene_summaries/cnv_gene_3700663536_r13.tsv gene_summaries/cnv_gene_3700663206_r13.tsv gene_summaries/cnv_gene_3700652073_r13.tsv gene_summaries/cnv_gene_3700663608_r13.tsv gene_summaries/cnv_gene_3700648969_r13.tsv gene_summaries/cnv_gene_3700650955_r13.tsv gene_summaries/cnv_gene_3700652169_r13.tsv gene_summaries/cnv_gene_471142228_r13.tsv gene_summaries/cnv_gene_3700651506_r13.tsv gene_summaries/cnv_gene_3700648988_r13.tsv gene_summaries/cnv_gene_3700663239_r13.tsv gene_summaries/cnv_gene_3700651505_r13.tsv gene_summaries/cnv_gene_3619659357_r13.tsv gene_summaries/cnv_gene_3700651001_r13.tsv gene_summaries/cnv_gene_3700651315_r13.tsv gene_summaries/cnv_gene_3700663623_r13.tsv gene_summaries/cnv_gene_3700663391_r13.tsv gene_summaries/cnv_gene_3700652048_r13.tsv gene_summaries/cnv_gene_471141764_r13.tsv gene_summaries/cnv_gene_3619659355_r13.tsv gene_summaries/cnv_gene_471141763_r13.tsv gene_summaries/cnv_gene_3700663368_r13.tsv gene_summaries/cnv_gene_3700663560_r13.tsv gene_summaries/cnv_gene_471141748_r13.tsv gene_summaries/cnv_gene_471141424_r13.tsv gene_summaries/cnv_gene_471142222_r13.tsv gene_summaries/cnv_gene_3700663583_r13.tsv gene_summaries/cnv_gene_3700652087_r13.tsv gene_summaries/cnv_gene_3700663539_r13.tsv gene_summaries/cnv_gene_3579468541_r13.tsv gene_summaries/cnv_gene_3700651020_r13.tsv gene_summaries/cnv_gene_3700651331_r13.tsv gene_summaries/cnv_gene_471140804_r13.tsv gene_summaries/cnv_gene_3700651365_r13.tsv gene_summaries/cnv_gene_3700663347_r13.tsv gene_summaries/cnv_gene_3700651026_r13.tsv gene_summaries/cnv_gene_3700652072_r13.tsv gene_summaries/cnv_gene_3700651313_r13.tsv gene_summaries/cnv_gene_3700650033_r13.tsv gene_summaries/cnv_gene_471140788_r13.tsv gene_summaries/cnv_gene_3700663559_r13.tsv gene_summaries/cnv_gene_471203138_r13.tsv gene_summaries/cnv_gene_3700663176_r13.tsv gene_summaries/cnv_gene_3700663431_r13.tsv gene_summaries/cnv_gene_3700663155_r13.tsv gene_summaries/cnv_gene_471200525_r13.tsv gene_summaries/cnv_gene_3700663593_r13.tsv gene_summaries/cnv_gene_3700663236_r13.tsv gene_summaries/cnv_gene_3700650952_r13.tsv gene_summaries/cnv_gene_471140782_r13.tsv gene_summaries/cnv_gene_3700651432_r13.tsv gene_summaries/cnv_gene_3700663620_r13.tsv gene_summaries/cnv_gene_3700651025_r13.tsv gene_summaries/cnv_gene_3700663367_r13.tsv gene_summaries/cnv_gene_3700652113_r13.tsv gene_summaries/cnv_gene_3700663199_r13.tsv gene_summaries/cnv_gene_3700651394_r13.tsv gene_summaries/cnv_gene_3700652062_r13.tsv gene_summaries/cnv_gene_3700651481_r13.tsv gene_summaries/cnv_gene_3700651484_r13.tsv gene_summaries/cnv_gene_3700650984_r13.tsv gene_summaries/cnv_gene_3700652168_r13.tsv gene_summaries/cnv_gene_3700648890_r13.tsv gene_summaries/cnv_gene_3700651509_r13.tsv gene_summaries/cnv_gene_3700650199_r13.tsv gene_summaries/cnv_gene_3700652017_r13.tsv gene_summaries/cnv_gene_3700652153_r13.tsv gene_summaries/cnv_gene_3700651395_r13.tsv gene_summaries/cnv_gene_3700652031_r13.tsv gene_summaries/cnv_gene_3700648994_r13.tsv gene_summaries/cnv_gene_3700648965_r13.tsv gene_summaries/cnv_gene_3599846892_r13.tsv gene_summaries/cnv_gene_3700651325_r13.tsv gene_summaries/cnv_gene_3700651500_r13.tsv gene_summaries/cnv_gene_3601213931_r13.tsv gene_summaries/cnv_gene_3574259226_r13.tsv gene_summaries/cnv_gene_471200531_r13.tsv gene_summaries/cnv_gene_471142243_r13.tsv gene_summaries/cnv_gene_471142244_r13.tsv gene_summaries/cnv_gene_3700651454_r13.tsv gene_summaries/cnv_gene_3619658683_r13.tsv gene_summaries/cnv_gene_471141422_r13.tsv gene_summaries/cnv_gene_3700652037_r13.tsv gene_summaries/cnv_gene_471140803_r13.tsv gene_summaries/cnv_gene_3700663152_r13.tsv gene_summaries/cnv_gene_471204507_r13.tsv gene_summaries/cnv_gene_3700650063_r13.tsv gene_summaries/cnv_gene_3700663401_r13.tsv gene_summaries/cnv_gene_3700651388_r13.tsv gene_summaries/cnv_gene_3700663209_r13.tsv gene_summaries/cnv_gene_471204218_r13.tsv gene_summaries/cnv_gene_3700663428_r13.tsv gene_summaries/cnv_gene_3700650974_r13.tsv gene_summaries/cnv_gene_471203202_r13.tsv gene_summaries/cnv_gene_471141742_r13.tsv gene_summaries/cnv_gene_3700663175_r13.tsv gene_summaries/cnv_gene_3700648923_r13.tsv gene_summaries/cnv_gene_3619658685_r13.tsv gene_summaries/cnv_gene_3700648995_r13.tsv gene_summaries/cnv_gene_3700652106_r13.tsv gene_summaries/cnv_gene_3700651029_r13.tsv gene_summaries/cnv_gene_3700652040_r13.tsv gene_summaries/cnv_gene_3700651008_r13.tsv gene_summaries/cnv_gene_3574258969_r13.tsv gene_summaries/cnv_gene_3700650990_r13.tsv gene_summaries/cnv_gene_3700651314_r13.tsv gene_summaries/cnv_gene_3700652187_r13.tsv gene_summaries/cnv_gene_3700663542_r13.tsv gene_summaries/cnv_gene_3700650216_r13.tsv gene_summaries/cnv_gene_3700663158_r13.tsv gene_summaries/cnv_gene_3700652119_r13.tsv gene_summaries/cnv_gene_3700651030_r13.tsv gene_summaries/cnv_gene_3700651000_r13.tsv gene_summaries/cnv_gene_3574103386_r13.tsv gene_summaries/cnv_gene_3700651324_r13.tsv gene_summaries/cnv_gene_3700652145_r13.tsv gene_summaries/cnv_gene_3700651492_r13.tsv gene_summaries/cnv_gene_3700663606_r13.tsv gene_summaries/cnv_gene_471142226_r13.tsv gene_summaries/cnv_gene_471201190_r13.tsv gene_summaries/cnv_gene_471142232_r13.tsv gene_summaries/cnv_gene_3700651370_r13.tsv gene_summaries/cnv_gene_3619659360_r13.tsv gene_summaries/cnv_gene_3700652141_r13.tsv gene_summaries/cnv_gene_3700663412_r13.tsv gene_summaries/cnv_gene_3700651480_r13.tsv gene_summaries/cnv_gene_471142231_r13.tsv gene_summaries/cnv_gene_3700650474_r13.tsv gene_summaries/cnv_gene_3700663400_r13.tsv gene_summaries/cnv_gene_3574259133_r13.tsv gene_summaries/cnv_gene_3700663350_r13.tsv gene_summaries/cnv_gene_3619658691_r13.tsv gene_summaries/cnv_gene_3619658679_r13.tsv gene_summaries/cnv_gene_471203204_r13.tsv gene_summaries/cnv_gene_3700648980_r13.tsv gene_summaries/cnv_gene_471141751_r13.tsv gene_summaries/cnv_gene_3700652105_r13.tsv gene_summaries/cnv_gene_3700652045_r13.tsv gene_summaries/cnv_gene_471141418_r13.tsv gene_summaries/cnv_gene_3700663414_r13.tsv gene_summaries/cnv_gene_3700663611_r13.tsv gene_summaries/cnv_gene_3700663227_r13.tsv gene_summaries/cnv_gene_3700652066_r13.tsv gene_summaries/cnv_gene_471141427_r13.tsv gene_summaries/cnv_gene_3619658688_r13.tsv gene_summaries/cnv_gene_3700663592_r13.tsv gene_summaries/cnv_gene_471141746_r13.tsv gene_summaries/cnv_gene_3700652186_r13.tsv gene_summaries/cnv_gene_3579469046_r13.tsv gene_summaries/cnv_gene_3700652094_r13.tsv gene_summaries/cnv_gene_3700651503_r13.tsv gene_summaries/cnv_gene_3579468869_r13.tsv gene_summaries/cnv_gene_3700650972_r13.tsv gene_summaries/cnv_gene_3619658690_r13.tsv gene_summaries/cnv_gene_3619659351_r13.tsv gene_summaries/cnv_gene_3700663208_r13.tsv gene_summaries/cnv_gene_3700651034_r13.tsv gene_summaries/cnv_gene_471140786_r13.tsv gene_summaries/cnv_gene_3700651470_r13.tsv gene_summaries/cnv_gene_3700651380_r13.tsv gene_summaries/cnv_gene_3619659362_r13.tsv gene_summaries/cnv_gene_3700652023_r13.tsv gene_summaries/cnv_gene_471141429_r13.tsv gene_summaries/cnv_gene_3700663222_r13.tsv gene_summaries/cnv_gene_3700663220_r13.tsv gene_summaries/cnv_gene_3619659363_r13.tsv gene_summaries/cnv_gene_3700648970_r13.tsv gene_summaries/cnv_gene_471203140_r13.tsv gene_summaries/cnv_gene_3601213777_r13.tsv gene_summaries/cnv_gene_471140791_r13.tsv gene_summaries/cnv_gene_471141752_r13.tsv gene_summaries/cnv_gene_3700663604_r13.tsv gene_summaries/cnv_gene_3700650962_r13.tsv gene_summaries/cnv_gene_471203700_r13.tsv gene_summaries/cnv_gene_3700663566_r13.tsv gene_summaries/cnv_gene_3579447764_r13.tsv gene_summaries/cnv_gene_3700663419_r13.tsv gene_summaries/cnv_gene_471203424_r13.tsv gene_summaries/cnv_gene_471140792_r13.tsv gene_summaries/cnv_gene_3700652049_r13.tsv gene_summaries/cnv_gene_3700651329_r13.tsv gene_summaries/cnv_gene_471141430_r13.tsv gene_summaries/cnv_gene_3700651488_r13.tsv gene_summaries/cnv_gene_3700651510_r13.tsv gene_summaries/cnv_gene_3700663374_r13.tsv gene_summaries/cnv_gene_3700648967_r13.tsv gene_summaries/cnv_gene_3700652032_r13.tsv gene_summaries/cnv_gene_3700651367_r13.tsv gene_summaries/cnv_gene_3574101803_r13.tsv gene_summaries/cnv_gene_3700651452_r13.tsv gene_summaries/cnv_gene_3700651012_r13.tsv gene_summaries/cnv_gene_3700663182_r13.tsv gene_summaries/cnv_gene_3601213315_r13.tsv)
head -1 "${gene_files[0]}" > cnv_gene_summary.tsv
for f in "${gene_files[@]}"; do
    tail -n +2 "$f" >> cnv_gene_summary.tsv
done