File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/3ef5a19d494e0b1d2332526c33694e/.command.err
Size
1.5 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ot3ix5ln because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 23:14:28,309 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 23:14:29,083 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 23:14:29,105 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_4.parquet
2026-06-08 23:14:29,997 - cnv_pipe.batch.run_model - INFO - Loaded data with 93 samples
2026-06-08 23:14:29,998 - cnv_pipe.batch.run_model - INFO - Loading per-probe beta priors from beta_constrain.tsv
2026-06-08 23:14:30,007 - cnv_pipe.batch.run_model - INFO - Matched beta priors for 50 / 22880 probes from beta_constrain.tsv
2026-06-08 23:14:30,390 - cnv_pipe.batch.run_model.cluster111 - INFO - Child process started for cluster 111 with 127 probes
2026-06-08 23:16:44,186 - cnv_pipe.batch.run_model.cluster111 - INFO - Child process finished cluster 111. Wrote clusters_4/cluster_111_samples.csv and clusters_4/cluster_111_params.csv
2026-06-08 23:16:44,187 - cnv_pipe.batch.run_model - INFO - Cluster 111 processed successfully with status SUCCESS
2026-06-08 23:16:44,187 - cnv_pipe.batch.run_model - INFO - All done. Processed the cluster 111 in 134.17 seconds