[2026-06-02 20:57:18] [miniwdl-eks.task] Staging: downloading command and 1 inputs
cp s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/88/887de0fbb979da3760b4e992128d1ff4/command /tmp/miniwdl_task/command
cp s3://natera-rnd-pltf-dev/platform-users/keckstrom/igv_snapshot/cd46_low_perf_beds/3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.bed /tmp/miniwdl_task/work/_miniwdl_inputs/0/3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.bed
[2026-06-02 20:57:18] [miniwdl-eks.task] Staging completed (1 inputs, 206ms) s5cmd=workers:256,concurrency:10,cpus:24
+ cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.bed --input-name 3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G --output-script 3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.igv_script.txt
2026-06-02 20:57:20,771 mt-a83f6331d5694531bb8359ff8cdc4405-wb8mv cgp_misc.__main__:main:36 [INFO]: Running command: cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.bed --input-name 3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G --output-script 3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.igv_script.txt
2026-06-02 20:57:20,816 mt-a83f6331d5694531bb8359ff8cdc4405-wb8mv cgp_misc.__main__:main:39 [INFO]: Completed successfully.
[2026-06-02 20:57:20] [miniwdl-eks.task] Task finished exit_code=0 (2088ms)
cp /tmp/miniwdl_task/stdout.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/88/887de0fbb979da3760b4e992128d1ff4/stdout.txt
cp /tmp/miniwdl_task/stderr.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/88/887de0fbb979da3760b4e992128d1ff4/stderr.txt
cp work/3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.igv_script.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/88/887de0fbb979da3760b4e992128d1ff4/work/3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.igv_script.txt
cp work/_miniwdl_inputs/0/3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.bed s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/88/887de0fbb979da3760b4e992128d1ff4/work/_miniwdl_inputs/0/3599996120_r8_L48__chr1_207767660_GCTTCTTCCTTATATGT_G.bed
cp /tmp/miniwdl_task/timing.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/88/887de0fbb979da3760b4e992128d1ff4/timing.json
cp /tmp/miniwdl_task/metrics.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/88/887de0fbb979da3760b4e992128d1ff4/metrics.json
cp /tmp/miniwdl_task/exit_code s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/88/887de0fbb979da3760b4e992128d1ff4/exit_code
[2026-06-02 20:57:21] [miniwdl-eks.task] Done exit_code=0 (338ms unstage, 2634ms total)