[2026-06-02 20:57:18] [miniwdl-eks.task] Staging: downloading command and 1 inputs
cp s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/7c/7c64ace13902b2e7ddf3b0f32c9468c0/command /tmp/miniwdl_task/command
cp s3://natera-rnd-pltf-dev/platform-users/keckstrom/igv_snapshot/cd46_low_perf_beds/3574259133_r7__chr1_207767038_C_T.bed /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574259133_r7__chr1_207767038_C_T.bed
[2026-06-02 20:57:18] [miniwdl-eks.task] Staging completed (1 inputs, 188ms) s5cmd=workers:256,concurrency:10,cpus:24
+ cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574259133_r7__chr1_207767038_C_T.bed --input-name 3574259133_r7__chr1_207767038_C_T --output-script 3574259133_r7__chr1_207767038_C_T.igv_script.txt
2026-06-02 20:57:20,760 mt-c31f1643da92420798e0b0b4b9c253ec-vk668 cgp_misc.__main__:main:36 [INFO]: Running command: cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574259133_r7__chr1_207767038_C_T.bed --input-name 3574259133_r7__chr1_207767038_C_T --output-script 3574259133_r7__chr1_207767038_C_T.igv_script.txt
2026-06-02 20:57:20,797 mt-c31f1643da92420798e0b0b4b9c253ec-vk668 cgp_misc.__main__:main:39 [INFO]: Completed successfully.
[2026-06-02 20:57:20] [miniwdl-eks.task] Task finished exit_code=0 (2092ms)
cp /tmp/miniwdl_task/stdout.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/7c/7c64ace13902b2e7ddf3b0f32c9468c0/stdout.txt
cp /tmp/miniwdl_task/stderr.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/7c/7c64ace13902b2e7ddf3b0f32c9468c0/stderr.txt
cp work/_miniwdl_inputs/0/3574259133_r7__chr1_207767038_C_T.bed s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/7c/7c64ace13902b2e7ddf3b0f32c9468c0/work/_miniwdl_inputs/0/3574259133_r7__chr1_207767038_C_T.bed
cp work/3574259133_r7__chr1_207767038_C_T.igv_script.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/7c/7c64ace13902b2e7ddf3b0f32c9468c0/work/3574259133_r7__chr1_207767038_C_T.igv_script.txt
cp /tmp/miniwdl_task/timing.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/7c/7c64ace13902b2e7ddf3b0f32c9468c0/timing.json
cp /tmp/miniwdl_task/metrics.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/7c/7c64ace13902b2e7ddf3b0f32c9468c0/metrics.json
cp /tmp/miniwdl_task/exit_code s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/7c/7c64ace13902b2e7ddf3b0f32c9468c0/exit_code
[2026-06-02 20:57:21] [miniwdl-eks.task] Done exit_code=0 (342ms unstage, 2623ms total)