[2026-06-02 20:57:18] [miniwdl-eks.task] Staging: downloading command and 1 inputs
cp s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/2e/2e5c8084f14eec1c331aea57b936ff65/command /tmp/miniwdl_task/command
cp s3://natera-rnd-pltf-dev/platform-users/keckstrom/igv_snapshot/cd46_low_perf_beds/3574258927_r7__chr1_207752091_A_G.bed /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574258927_r7__chr1_207752091_A_G.bed
[2026-06-02 20:57:18] [miniwdl-eks.task] Staging completed (1 inputs, 262ms) s5cmd=workers:256,concurrency:10,cpus:24
+ cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574258927_r7__chr1_207752091_A_G.bed --input-name 3574258927_r7__chr1_207752091_A_G --output-script 3574258927_r7__chr1_207752091_A_G.igv_script.txt
2026-06-02 20:57:20,589 mt-763abb271c74403090bc2a9fb44e1593-h6bpr cgp_misc.__main__:main:36 [INFO]: Running command: cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574258927_r7__chr1_207752091_A_G.bed --input-name 3574258927_r7__chr1_207752091_A_G --output-script 3574258927_r7__chr1_207752091_A_G.igv_script.txt
2026-06-02 20:57:20,635 mt-763abb271c74403090bc2a9fb44e1593-h6bpr cgp_misc.__main__:main:39 [INFO]: Completed successfully.
[2026-06-02 20:57:20] [miniwdl-eks.task] Task finished exit_code=0 (1878ms)
cp /tmp/miniwdl_task/stdout.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/2e/2e5c8084f14eec1c331aea57b936ff65/stdout.txt
cp /tmp/miniwdl_task/stderr.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/2e/2e5c8084f14eec1c331aea57b936ff65/stderr.txt
cp work/3574258927_r7__chr1_207752091_A_G.igv_script.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/2e/2e5c8084f14eec1c331aea57b936ff65/work/3574258927_r7__chr1_207752091_A_G.igv_script.txt
cp work/_miniwdl_inputs/0/3574258927_r7__chr1_207752091_A_G.bed s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/2e/2e5c8084f14eec1c331aea57b936ff65/work/_miniwdl_inputs/0/3574258927_r7__chr1_207752091_A_G.bed
cp /tmp/miniwdl_task/timing.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/2e/2e5c8084f14eec1c331aea57b936ff65/timing.json
cp /tmp/miniwdl_task/metrics.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/2e/2e5c8084f14eec1c331aea57b936ff65/metrics.json
cp /tmp/miniwdl_task/exit_code s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/2e/2e5c8084f14eec1c331aea57b936ff65/exit_code
[2026-06-02 20:57:21] [miniwdl-eks.task] Done exit_code=0 (392ms unstage, 2533ms total)