[2026-06-02 20:57:18] [miniwdl-eks.task] Staging: downloading command and 1 inputs
cp s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/1c/1c0b1665ecbc5906665daff8b118e6fc/command /tmp/miniwdl_task/command
cp s3://natera-rnd-pltf-dev/platform-users/keckstrom/igv_snapshot/cd46_low_perf_beds/3574259133_r8_L48__chr1_207767038_C_T.bed /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574259133_r8_L48__chr1_207767038_C_T.bed
[2026-06-02 20:57:18] [miniwdl-eks.task] Staging completed (1 inputs, 224ms) s5cmd=workers:256,concurrency:10,cpus:24
+ cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574259133_r8_L48__chr1_207767038_C_T.bed --input-name 3574259133_r8_L48__chr1_207767038_C_T --output-script 3574259133_r8_L48__chr1_207767038_C_T.igv_script.txt
2026-06-02 20:57:20,775 mt-45594d648ccf4942bead8580037a0e74-8q45j cgp_misc.__main__:main:36 [INFO]: Running command: cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574259133_r8_L48__chr1_207767038_C_T.bed --input-name 3574259133_r8_L48__chr1_207767038_C_T --output-script 3574259133_r8_L48__chr1_207767038_C_T.igv_script.txt
2026-06-02 20:57:20,831 mt-45594d648ccf4942bead8580037a0e74-8q45j cgp_misc.__main__:main:39 [INFO]: Completed successfully.
[2026-06-02 20:57:20] [miniwdl-eks.task] Task finished exit_code=0 (2092ms)
cp /tmp/miniwdl_task/stdout.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/1c/1c0b1665ecbc5906665daff8b118e6fc/stdout.txt
cp /tmp/miniwdl_task/stderr.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/1c/1c0b1665ecbc5906665daff8b118e6fc/stderr.txt
cp work/3574259133_r8_L48__chr1_207767038_C_T.igv_script.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/1c/1c0b1665ecbc5906665daff8b118e6fc/work/3574259133_r8_L48__chr1_207767038_C_T.igv_script.txt
cp work/_miniwdl_inputs/0/3574259133_r8_L48__chr1_207767038_C_T.bed s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/1c/1c0b1665ecbc5906665daff8b118e6fc/work/_miniwdl_inputs/0/3574259133_r8_L48__chr1_207767038_C_T.bed
cp /tmp/miniwdl_task/timing.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/1c/1c0b1665ecbc5906665daff8b118e6fc/timing.json
cp /tmp/miniwdl_task/metrics.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/1c/1c0b1665ecbc5906665daff8b118e6fc/metrics.json
cp /tmp/miniwdl_task/exit_code s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/1c/1c0b1665ecbc5906665daff8b118e6fc/exit_code
[2026-06-02 20:57:21] [miniwdl-eks.task] Done exit_code=0 (405ms unstage, 2723ms total)