[2026-06-02 20:57:18] [miniwdl-eks.task] Staging: downloading command and 1 inputs
cp s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/01/01f8b10e265b1ba6a4c6784c21095aab/command /tmp/miniwdl_task/command
cp s3://natera-rnd-pltf-dev/platform-users/keckstrom/igv_snapshot/cd46_low_perf_beds/3574260291_r7__chr1_207752180_T_G.bed /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574260291_r7__chr1_207752180_T_G.bed
[2026-06-02 20:57:18] [miniwdl-eks.task] Staging completed (1 inputs, 209ms) s5cmd=workers:256,concurrency:10,cpus:24
+ cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574260291_r7__chr1_207752180_T_G.bed --input-name 3574260291_r7__chr1_207752180_T_G --output-script 3574260291_r7__chr1_207752180_T_G.igv_script.txt
2026-06-02 20:57:20,851 mt-1338d22b7b2d4503a3302f5d85cc0d65-j8vzj cgp_misc.__main__:main:36 [INFO]: Running command: cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574260291_r7__chr1_207752180_T_G.bed --input-name 3574260291_r7__chr1_207752180_T_G --output-script 3574260291_r7__chr1_207752180_T_G.igv_script.txt
2026-06-02 20:57:20,897 mt-1338d22b7b2d4503a3302f5d85cc0d65-j8vzj cgp_misc.__main__:main:39 [INFO]: Completed successfully.
[2026-06-02 20:57:20] [miniwdl-eks.task] Task finished exit_code=0 (2119ms)
cp /tmp/miniwdl_task/stdout.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/01/01f8b10e265b1ba6a4c6784c21095aab/stdout.txt
cp /tmp/miniwdl_task/stderr.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/01/01f8b10e265b1ba6a4c6784c21095aab/stderr.txt
cp work/_miniwdl_inputs/0/3574260291_r7__chr1_207752180_T_G.bed s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/01/01f8b10e265b1ba6a4c6784c21095aab/work/_miniwdl_inputs/0/3574260291_r7__chr1_207752180_T_G.bed
cp work/3574260291_r7__chr1_207752180_T_G.igv_script.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/01/01f8b10e265b1ba6a4c6784c21095aab/work/3574260291_r7__chr1_207752180_T_G.igv_script.txt
cp /tmp/miniwdl_task/timing.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/01/01f8b10e265b1ba6a4c6784c21095aab/timing.json
cp /tmp/miniwdl_task/metrics.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/01/01f8b10e265b1ba6a4c6784c21095aab/metrics.json
cp /tmp/miniwdl_task/exit_code s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/01/01f8b10e265b1ba6a4c6784c21095aab/exit_code
[2026-06-02 20:57:21] [miniwdl-eks.task] Done exit_code=0 (301ms unstage, 2630ms total)