[2026-06-02 20:57:18] [miniwdl-eks.task] Staging: downloading command and 1 inputs
cp s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/dd/dddbc075f73b7ce1ec8e6558e7a965fb/command /tmp/miniwdl_task/command
cp s3://natera-rnd-pltf-dev/platform-users/keckstrom/igv_snapshot/cd46_low_perf_beds/3599996116_r7__chr1_207757177_A_G.bed /tmp/miniwdl_task/work/_miniwdl_inputs/0/3599996116_r7__chr1_207757177_A_G.bed
[2026-06-02 20:57:18] [miniwdl-eks.task] Staging completed (1 inputs, 208ms) s5cmd=workers:256,concurrency:10,cpus:24
+ cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3599996116_r7__chr1_207757177_A_G.bed --input-name 3599996116_r7__chr1_207757177_A_G --output-script 3599996116_r7__chr1_207757177_A_G.igv_script.txt
2026-06-02 20:57:20,656 mt-907e852fa7b74f5bad639cc357a05915-cjggv cgp_misc.__main__:main:36 [INFO]: Running command: cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3599996116_r7__chr1_207757177_A_G.bed --input-name 3599996116_r7__chr1_207757177_A_G --output-script 3599996116_r7__chr1_207757177_A_G.igv_script.txt
2026-06-02 20:57:20,698 mt-907e852fa7b74f5bad639cc357a05915-cjggv cgp_misc.__main__:main:39 [INFO]: Completed successfully.
[2026-06-02 20:57:20] [miniwdl-eks.task] Task finished exit_code=0 (1997ms)
cp /tmp/miniwdl_task/stdout.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/dd/dddbc075f73b7ce1ec8e6558e7a965fb/stdout.txt
cp /tmp/miniwdl_task/stderr.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/dd/dddbc075f73b7ce1ec8e6558e7a965fb/stderr.txt
cp work/3599996116_r7__chr1_207757177_A_G.igv_script.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/dd/dddbc075f73b7ce1ec8e6558e7a965fb/work/3599996116_r7__chr1_207757177_A_G.igv_script.txt
cp work/_miniwdl_inputs/0/3599996116_r7__chr1_207757177_A_G.bed s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/dd/dddbc075f73b7ce1ec8e6558e7a965fb/work/_miniwdl_inputs/0/3599996116_r7__chr1_207757177_A_G.bed
cp /tmp/miniwdl_task/timing.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/dd/dddbc075f73b7ce1ec8e6558e7a965fb/timing.json
cp /tmp/miniwdl_task/metrics.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/dd/dddbc075f73b7ce1ec8e6558e7a965fb/metrics.json
cp /tmp/miniwdl_task/exit_code s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/dd/dddbc075f73b7ce1ec8e6558e7a965fb/exit_code
[2026-06-02 20:57:21] [miniwdl-eks.task] Done exit_code=0 (349ms unstage, 2556ms total)