[2026-06-02 20:57:18] [miniwdl-eks.task] Staging: downloading command and 1 inputs
cp s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/a1/a1f538bbd0c59d17f1baa610a1a0c3a8/command /tmp/miniwdl_task/command
cp s3://natera-rnd-pltf-dev/platform-users/keckstrom/igv_snapshot/cd46_low_perf_beds/3574260343_r7__chr1_207794260_C_G.bed /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574260343_r7__chr1_207794260_C_G.bed
[2026-06-02 20:57:18] [miniwdl-eks.task] Staging completed (1 inputs, 213ms) s5cmd=workers:256,concurrency:10,cpus:24
+ cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574260343_r7__chr1_207794260_C_G.bed --input-name 3574260343_r7__chr1_207794260_C_G --output-script 3574260343_r7__chr1_207794260_C_G.igv_script.txt
2026-06-02 20:57:20,608 mt-9d7d2aa114d146019e475d953d939d8e-fg2bw cgp_misc.__main__:main:36 [INFO]: Running command: cgp-misc igv_tools generate-igv-script --input-regions-file /tmp/miniwdl_task/work/_miniwdl_inputs/0/3574260343_r7__chr1_207794260_C_G.bed --input-name 3574260343_r7__chr1_207794260_C_G --output-script 3574260343_r7__chr1_207794260_C_G.igv_script.txt
2026-06-02 20:57:20,645 mt-9d7d2aa114d146019e475d953d939d8e-fg2bw cgp_misc.__main__:main:39 [INFO]: Completed successfully.
[2026-06-02 20:57:20] [miniwdl-eks.task] Task finished exit_code=0 (1936ms)
cp /tmp/miniwdl_task/stdout.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/a1/a1f538bbd0c59d17f1baa610a1a0c3a8/stdout.txt
cp /tmp/miniwdl_task/stderr.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/a1/a1f538bbd0c59d17f1baa610a1a0c3a8/stderr.txt
cp work/3574260343_r7__chr1_207794260_C_G.igv_script.txt s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/a1/a1f538bbd0c59d17f1baa610a1a0c3a8/work/3574260343_r7__chr1_207794260_C_G.igv_script.txt
cp work/_miniwdl_inputs/0/3574260343_r7__chr1_207794260_C_G.bed s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/a1/a1f538bbd0c59d17f1baa610a1a0c3a8/work/_miniwdl_inputs/0/3574260343_r7__chr1_207794260_C_G.bed
cp /tmp/miniwdl_task/timing.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/a1/a1f538bbd0c59d17f1baa610a1a0c3a8/timing.json
cp /tmp/miniwdl_task/metrics.json s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/a1/a1f538bbd0c59d17f1baa610a1a0c3a8/metrics.json
cp /tmp/miniwdl_task/exit_code s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/a1/a1f538bbd0c59d17f1baa610a1a0c3a8/exit_code
[2026-06-02 20:57:21] [miniwdl-eks.task] Done exit_code=0 (306ms unstage, 2457ms total)