File Info
- Filename
- Quality_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_rna_exp0032/A2327GFLT3/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Quality_Metrics.csv
- Size
- 1.5 KB
- Workflow Run
- cgp_rna_exp0032_73d51683
- Published
- Jun 07, 2026 11:11 PM
Content
View in new tab| Lane | SampleID | index | index2 | ReadNumber | Yield | YieldQ30 | QualityScoreSum | Mean Quality Score (PF) | % Q30 |
| 5 | rna_s1804 | CTGATCGT | GCGCATAT | 1 | 9595202286 | 8916327301 | 369821871685 | 38.54 | 0.93 |
| 5 | rna_s1804 | CTGATCGT | GCGCATAT | 2 | 9595202286 | 8721650849 | 365387544476 | 38.08 | 0.91 |
| 5 | rna_s1805 | ACTCTCGA | CTGTACCA | 1 | 11124853124 | 10295266504 | 427737649237 | 38.45 | 0.93 |
| 5 | rna_s1805 | ACTCTCGA | CTGTACCA | 2 | 11124853124 | 10094888880 | 423243253620 | 38.04 | 0.91 |
| 5 | rna_s1806 | TGAGCTAG | GAACGGTT | 1 | 11241616743 | 10452823970 | 433424870387 | 38.56 | 0.93 |
| 5 | rna_s1806 | TGAGCTAG | GAACGGTT | 2 | 11241616743 | 10292467273 | 429803515348 | 38.23 | 0.92 |
| 5 | rna_s1807 | GAGACGAT | ACCGGTTA | 1 | 8909270290 | 8286736672 | 343548729487 | 38.56 | 0.93 |
| 5 | rna_s1807 | GAGACGAT | ACCGGTTA | 2 | 8909270290 | 8104475949 | 339468699492 | 38.10 | 0.91 |
| 5 | rna_s1808 | CTTGTCGA | CGATGTTC | 1 | 12029779816 | 11131501601 | 462563191367 | 38.45 | 0.93 |
| 5 | rna_s1808 | CTTGTCGA | CGATGTTC | 2 | 12029779816 | 10948212000 | 458462359380 | 38.11 | 0.91 |
| 5 | rna_s1809 | TTCCAAGG | CTACAAGG | 1 | 11224842153 | 10373462661 | 431351285016 | 38.43 | 0.92 |
| 5 | rna_s1809 | TTCCAAGG | CTACAAGG | 2 | 11224842153 | 10233814552 | 428198195104 | 38.15 | 0.91 |
| 5 | rna_s1810 | CGCATGAT | AAGCCTGA | 1 | 9376221935 | 8718874782 | 361456441893 | 38.55 | 0.93 |
| 5 | rna_s1810 | CGCATGAT | AAGCCTGA | 2 | 9376221935 | 8560896241 | 357835039993 | 38.16 | 0.91 |
| 5 | rna_s1811 | ACGGAACA | ACGAGAAC | 1 | 7580462740 | 7048949767 | 292255957576 | 38.55 | 0.93 |
| 5 | rna_s1811 | ACGGAACA | ACGAGAAC | 2 | 7580462740 | 6918437230 | 289339735264 | 38.17 | 0.91 |
| 5 | Undetermined | 1 | 126188804497 | 110056523137 | 4688585349979 | 37.16 | 0.87 | ||
| 5 | Undetermined | 2 | 126188804497 | 107396972087 | 4623840471962 | 36.64 | 0.85 |
19 rows